Atsushi Miyake

Dr. Atsushi Miyake

orcid

Research Focus & Metrics

Academic Career Length

5Years (2022-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 July 2022 in Journal of Fungi
Verified
Journal Article
Open access
PDF file
AMAtsushi Miyake
Atsushi Miyake
KGKenji Gotoh
Kenji Gotoh
JIJun Iwahashi
Jun Iwahashi
ATAkinobu Togo
Akinobu Togo
RHRie Horita
Rie Horita
HWHiroshi Watanabe
Hiroshi Watanabe
Background: We dealt with the occurrence of an outbreak of Candida parapsilosis in a neonatal intensive care unit (NICU) in September 2020. There have been several reports of C. parapsilosis outbreaks in NICUs. In this study we describe our investigation into both the transmission route and the biofilm of C. parapsilosis. Methods: C. parapsilosis strains were detected in three inpatients and in two environmental cultures in our NICU. One environmental culture was isolated from the incubator used by a fungemia patient, and another was isolated from the humidifier of an incubator that had been used by a nonfungemia patient. To prove their identities, we tested them by micro satellite analysis. We used two methods, dry weight measurements and observation by electron microscopy, to confirm biofilm. Results: Microsatellite analysis showed the five C. parapsilosis cultures were of the same strain. Dry weight measurements and electron microscopy showed C. parapsilosis formed biofilms that amounted to clumps of fungal cells. Conclusions: We concluded that the outbreak happened due to horizontal transfer through the humidifier of the incubator and that the C. parapsilosis had produced biofilm, which promoted an invasive and infectious outbreak. Additionally, biofilm is closely associated with pathogenicity.

1 October 2025 in Journal of Infection and Chemotherapy
Verified
Journal Article
Closed access
AMAtsushi Miyake
Atsushi Miyake
KGKenji Gotoh
Kenji Gotoh
HMHiroyuki Miyazaki
Hiroyuki Miyazaki
KOKiyohito Okumiya
Kiyohito Okumiya
YTYuhei Tanaka
Yuhei Tanaka
HWHiroshi Watanabe
Hiroshi Watanabe

1 January 2025 in Pediatrics International
Verified
Journal Article
Closed access
AMAtsushi Miyake
Atsushi Miyake
KGKenji Gotoh
Kenji Gotoh
SSSaho Shima
Saho Shima
KOKiyohito Okumiya
Kiyohito Okumiya
RNRyuta Nishikomori
Ryuta Nishikomori
TMTatsuki Mizuochi
Tatsuki Mizuochi

6 November 2026 in Microorganisms
Verified
Journal Article
Open access
PDF file
HMHiroyuki Miyazaki
Hiroyuki Miyazaki
KGKenji Gotoh
Kenji Gotoh
MOMiki Okuno
Miki Okuno
AMAtsushi Miyake
Atsushi Miyake
KOKiyohito Okumiya
Kiyohito Okumiya
HWHiroshi Watanabe
Hiroshi Watanabe
Routine identification of Corynebacterium species can be challenging and may complicate investigation of suspected healthcare-associated transmission. We investigated a suspected cluster of blood culture isolates routinely identified as Corynebacterium jeikeium and retrospectively evaluated similarly identified isolates recovered at our hospital. After three patients in a hematology ward had blood cultures yielding C. jeikeium within approximately one month in 2024, pulsed-field gel electrophoresis (PFGE), environmental sampling, and follow-up surveillance were performed. We subsequently reviewed all blood culture isolates routinely identified as C. jeikeium from 2019 to 2025. Ten isolates from 10 unique patients underwent long-read whole-genome sequencing (WGS). Species identity was assessed by average nucleotide identity (ANI) against type-strain genomes, and genomic relatedness by core-genome phylogenetic and pairwise genome analyses. PFGE showed indistinguishable patterns for two cluster-associated isolates. No environmental isolate was identified as Corynebacterium spp., and no additional temporally associated cases were detected. WGS identified all 10 isolates as C. macclintockiae and did not support a single-clone transmission event; the two isolates with indistinguishable PFGE patterns were closely related but not genomically identical. However, direct or indirect transmission between the corresponding patients could not be excluded. These findings support integrating epidemiological investigation, accurate species identification, and high-resolution genomic analysis when evaluating suspected healthcare-associated transmission involving members of the C. jeikeium complex.

18 September 2026 in Pediatrics & Neonatology
Verified
Journal Article
Open access
TATaisei Ayaka
Taisei Ayaka
ZKZenpei Kano
Zenpei Kano
WTWataru Tanaka
Wataru Tanaka
YNYuiko Nakabayashi
Yuiko Nakabayashi
ATAkihiko Tamaki
Akihiko Tamaki
THTakayuki Hoshina
Takayuki Hoshina