Dmitry Yarmolinsky

Dr. Dmitry Yarmolinsky


Research Focus & Metrics

Academic Career Length

20Years (2007-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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6 October 2017 in Plant Physiology
Verified
Journal Article
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PDF file
EMEbe Merilo
Ebe Merilo
DYDmitry Yarmolinsky
Dmitry Yarmolinsky
PJPirko Jalakas
Pirko Jalakas
HPHelen Parik
Helen Parik
ITIngmar Tulva
Ingmar Tulva
HKHannes Kollist
Hannes Kollist
Guard cells shrink and close stomatal pores when air humidity decreases (i.e. when the difference between the vapor pressures of leaf and atmosphere [VPD] increases). The role of abscisic acid (ABA) in VPD-induced stomatal closure has been studied using ABA-related mutants that respond to VPD in some studies and not in others. The importance of ABA biosynthesis in guard cells versus vasculature for whole-plant stomatal regulation is unclear as well. Here, we show that Arabidopsis (Arabidopsis thaliana) lines carrying mutations in different steps of ABA biosynthesis as well as pea (Pisum sativum) wilty and tomato (Solanum lycopersicum) flacca ABA-deficient mutants had higher stomatal conductance compared with wild-type plants. To characterize the role of ABA production in different cells, we generated transgenic plants where ABA biosynthesis was rescued in guard cells or phloem companion cells of an ABA-deficient mutant. In both cases, the whole-plant stomatal conductance, stunted growth phenotype, and leaf ABA level were restored to wild-type values, pointing to the redundancy of ABA sources and to the effectiveness of leaf ABA transport. All ABA-deficient lines closed their stomata rapidly and extensively in response to high VPD, whereas plants with mutated protein kinase OST1 showed stunted VPD-induced responses. Another strongly ABA-insensitive mutant, defective in the six ABA PYR/RCAR receptors, responded to changes in VPD in both directions strongly and symmetrically, indicating that its VPD-induced closure could be passive hydraulic. We discuss that both the VPD-induced passive hydraulic stomatal closure and the stomatal VPD regulation of ABA-deficient mutants may be conditional on the initial pretreatment stomatal conductance.

25 October 2018 in The Plant Cell
Verified
Journal Article
Closed access
PDF file
MSMaija Sierla
Maija Sierla
HHHanna Hõrak
Hanna Hõrak
KOKirk Overmyer
Kirk Overmyer
CWCezary Waszczak
Cezary Waszczak
DYDmitry Yarmolinsky
Dmitry Yarmolinsky
JKJaakko Kangasjärvi
Jaakko Kangasjärvi
Guard cells control the aperture of stomatal pores to balance photosynthetic carbon dioxide uptake with evaporative water loss. Stomatal closure is triggered by several stimuli that initiate complex signaling networks to govern the activity of ion channels. Activation of SLOW ANION CHANNEL1 (SLAC1) is central to the process of stomatal closure and requires the leucine-rich repeat receptor-like kinase (LRR-RLK) GUARD CELL HYDROGEN PEROXIDE-RESISTANT1 (GHR1), among other signaling components. Here, based on functional analysis of nine Arabidopsis thaliana ghr1 mutant alleles identified in two independent forward-genetic ozone-sensitivity screens, we found that GHR1 is required for stomatal responses to apoplastic reactive oxygen species, abscisic acid, high CO2 concentrations, and diurnal light/dark transitions. Furthermore, we show that the amino acid residues of GHR1 involved in ATP binding are not required for stomatal closure in Arabidopsis or the activation of SLAC1 anion currents in Xenopus laevis oocytes and present supporting in silico and in vitro evidence suggesting that GHR1 is an inactive pseudokinase. Biochemical analyses suggested that GHR1-mediated activation of SLAC1 occurs via interacting proteins and that CALCIUM-DEPENDENT PROTEIN KINASE3 interacts with GHR1. We propose that GHR1 acts in stomatal closure as a scaffolding component.

7 December 2012 in Plant Physiology
Verified
Journal Article
Open access
PDF file
DYDmitry Yarmolinsky
Dmitry Yarmolinsky
GBGalina Brychkova
Galina Brychkova
RFRobert Fluhr
Robert Fluhr
MSMoshe Sagi
Moshe Sagi
Plant sulfite reductase (SiR; Enzyme Commission 1.8.7.1) catalyzes the reduction of sulfite to sulfide in the reductive sulfate assimilation pathway. Comparison of SiR expression in tomato (Solanum lycopersicum ‘Rheinlands Ruhm’) and Arabidopsis (Arabidopsis thaliana) plants revealed that SiR is expressed in a different tissue-dependent manner that likely reflects dissimilarity in sulfur metabolism between the plant species. Using Arabidopsis and tomato SiR mutants with modified SiR expression, we show here that resistance to ectopically applied sulfur dioxide/sulfite is a function of SiR expression levels and that plants with reduced SiR expression exhibit higher sensitivity than the wild type, as manifested in pronounced leaf necrosis and chlorophyll bleaching. The sulfite-sensitive mutants accumulate applied sulfite and show a decline in glutathione levels. In contrast, mutants that overexpress SiR are more tolerant to sulfite toxicity, exhibiting little or no damage. Resistance to high sulfite application is manifested by fast sulfite disappearance and an increase in glutathione levels. The notion that SiR plays a role in the protection of plants against sulfite is supported by the rapid up-regulation of SiR transcript and activity within 30 min of sulfite injection into Arabidopsis and tomato leaves. Peroxisomal sulfite oxidase transcripts and activity levels are likewise promoted by sulfite application as compared with water injection controls. These results indicate that, in addition to participating in the sulfate assimilation reductive pathway, SiR also plays a role in protecting leaves against the toxicity of sulfite accumulation.

9 December 2022 in Science Advances
Verified
Journal Article
Open access
YTYohei Takahashi
Yohei Takahashi
KBKrystal C. Bosmans
Krystal C. Bosmans
PHPo-Kai Hsu
Po-Kai Hsu
KPKarnelia Paul
Karnelia Paul
CSChristian Seitz
Christian Seitz
JSJulian I. Schroeder
Julian I. Schroeder
The continuing rise in the atmospheric carbon dioxide (CO 2 ) concentration causes stomatal closing, thus critically affecting transpirational water loss, photosynthesis, and plant growth. However, the primary CO 2 sensor remains unknown. Here, we show that elevated CO 2 triggers interaction of the MAP kinases MPK4/MPK12 with the HT1 protein kinase, thus inhibiting HT1 kinase activity. At low CO 2 , HT1 phosphorylates and activates the downstream negatively regulating CBC1 kinase. Physiologically relevant HT1-mediated phosphorylation sites in CBC1 are identified. In a genetic screen, we identify dominant active HT1 mutants that cause insensitivity to elevated CO 2 . Dominant HT1 mutants abrogate the CO 2 /bicarbonate-induced MPK4/12-HT1 interaction and HT1 inhibition, which may be explained by a structural AlphaFold2- and Gaussian-accelerated dynamics-generated model. Unexpectedly, MAP kinase activity is not required for CO 2 sensor function and CO 2 -triggered HT1 inhibition and stomatal closing. The presented findings reveal that MPK4/12 and HT1 together constitute the long-sought primary stomatal CO 2 /bicarbonate sensor upstream of the CBC1 kinase in plants.

18 October 2017 in ACS Chemical Biology
Verified
Journal Article
Closed access
AVAditya S. Vaidya
Aditya S. Vaidya
FPFrancis C. Peterson
Francis C. Peterson
DYDmitry Yarmolinsky
Dmitry Yarmolinsky
EMEbe Merilo
Ebe Merilo
IVInge Verstraeten
Inge Verstraeten
SCSean R. Cutler
Sean R. Cutler

10 February 2017 in Plant Physiology
Verified
Journal Article
Open access
PDF file
SSSudhakar Srivastava
Sudhakar Srivastava
GBGalina Brychkova
Galina Brychkova
DYDmitry Yarmolinsky
Dmitry Yarmolinsky
ASAigerim Soltabayeva
Aigerim Soltabayeva
TSTalya Samani
Talya Samani
MSMoshe Sagi
Moshe Sagi
AAO4 plays a critical role in delaying silique senescence by catalyzing aldehyde detoxification and generates both hydrogen peroxide and superoxide.