From the development and sale of a product through its delivery to the end customer, the supply chain encompasses a network of suppliers, transporters, warehouses, distribution centers, shipping lines, and logistics service providers all working together. Lead times, bottlenecks, cash flow, data management, risk exposure, traceability, conformity, quality assurance, flaws, and language barriers are some of the difficulties that supply chain management faces. In this paper, deep learning techniques such as Long Short-Term Memory (LSTM) and One Dimensional Convolutional Neural Network (1D-CNN) were adopted and applied to classify supply chain pricing datasets of health medications. Then, Bayesian optimization using the tree parzen estimator and All K Nearest Neighbor (AllkNN) was used to establish the suitable model hyper-parameters of both LSTM and 1D-CNN to enhance the classification model. Repeated five-fold cross-validation is applied to the developed models to predict the accuracy of the models. The study showed that the combination of 1D-CNN, AllkNN, and Bayesian optimization (1D-CNN+AllKNN+BO) outperforms other approaches employed in this study. The accuracy of the combination of 1D-CNN, AllkNN, and Bayesian optimization (1D-CNN+AllKNN+BO) from one-fold to 10-fold, produced the highest range between 61.2836% and 63.3267%, among other models.

This article is devoted to applying bioinformatics and immunoinformatics approaches for the development of a multi-epitope mRNA vaccine against the spike glycoproteins of circulating SARS-CoV-2 variants in selected African countries. The study’s relevance is dictated by the fact that severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) began its global threat at the end of 2019 and since then has had a devastating impact on the whole world. Measures to reduce threats from the pandemic include social restrictions, restrictions on international travel, and vaccine development. In most cases, vaccine development depends on the spike glycoprotein, which serves as a medium for its entry into host cells. Although several variants of SARS-CoV-2 have emerged from mutations crossing continental boundaries, about 6000 delta variants have been reported along the coast of more than 20 countries in Africa, with South Africa accounting for the highest percentage. This also applies to the omicron variant of the SARS-CoV-2 virus in South Africa. The authors suggest that bioinformatics and immunoinformatics approaches be used to develop a multi-epitope mRNA vaccine against the spike glycoproteins of circulating SARS-CoV-2 variants in selected African countries. Various immunoinformatics tools have been used to predict T- and B-lymphocyte epitopes. The epitopes were further subjected to multiple evaluations to select epitopes that could elicit a sustained immunological response. The candidate vaccine consisted of seven epitopes, a highly immunogenic adjuvant, an MHC I-targeting domain (MITD), a signal peptide, and linkers. The molecular weight (MW) was predicted to be 223.1 kDa, well above the acceptable threshold of 110 kDa on an excellent vaccine candidate. In addition, the results showed that the candidate vaccine was antigenic, non-allergenic, non-toxic, thermostable, and hydrophilic. The vaccine candidate has good population coverage, with the highest range in East Africa (80.44%) followed by South Africa (77.23%). West Africa and North Africa have 76.65% and 76.13%, respectively, while Central Africa (75.64%) has minimal coverage. Among seven epitopes, no mutations were observed in 100 randomly selected SARS-CoV-2 spike glycoproteins in the study area. Evaluation of the secondary structure of the vaccine constructs revealed a stabilized structure showing 36.44% alpha-helices, 20.45% drawn filaments, and 33.38% random helices. Molecular docking of the TLR4 vaccine showed that the simulated vaccine has a high binding affinity for TLR-4, reflecting its ability to stimulate the innate and adaptive immune response.

Over the past few decades, major advances in the field of molecular biology, coupled with advances in genomic technologies, have led to an explosive growth in the biological data generated by the scientific community. The critical need to process and analyze such a deluge of data and turn it into useful knowledge has caused bioinformatics to gain prominence and importance. Bioinformatics is an interdisciplinary research area that applies techniques, methodologies, and tools in computer and information science to solve biological problems. In Nigeria, bioinformatics has recently played a vital role in the advancement of biological sciences. As a developing country, the importance of bioinformatics is rapidly gaining acceptance, and bioinformatics groups comprised of biologists, computer scientists, and computer engineers are being constituted at Nigerian universities and research institutes. In this article, we present an overview of bioinformatics education and research in Nigeria. We also discuss professional societies and academic and research institutions that play central roles in advancing the discipline in Nigeria. Finally, we propose strategies that can bolster bioinformatics education and support from policy makers in Nigeria, with potential positive implications for other developing countries.

Public health is now in danger because of the current monkeypox outbreak, which has spread rapidly to more than 40 countries outside of Africa. The growing monkeypox epidemic has been classified as a “public health emergency of international concern” (PHEIC) by the World Health Organization (WHO). Infection outcomes, risk factors, clinical presentation, and transmission are all poorly understood. Computer- and machine-learning-assisted prediction and forecasting will be useful for controlling its spread. The objective of this research is to use the historical data of all reported human monkey pox cases to predict the transmission rate of the disease. This paper proposed stacking ensemble learning and machine learning techniques to forecast the rate of transmission of monkeypox. In this work, adaptive boosting regression (Adaboost), gradient boosting regression (GBOOST), random forest regression (RFR), ordinary least square regression (OLS), least absolute shrinkage selection operator regression (LASSO), and ridge regression (RIDGE) were applied for time series forecasting of monkeypox transmission. Performance metrics considered in this study are root mean square (RMSE), mean absolute error (MAE), and mean square error (MSE), which were used to evaluate the performance of the machine learning and the proposed Stacking Ensemble Learning (SEL) technique. Additionally, the monkey pox dataset was used as test data for this investigation. Experimental results revealed that SEL outperformed other machine learning approaches considered in this work with an RMSE of 33.1075; a MSE of 1096.1068; and a MAE of 22.4214. This is an indication that SEL is a better predictor than all the other models used in this study. It is hoped that this research will help government officials understand the threat of monkey pox and take the necessary mitigation actions.

Ebola Virus Disease (EVD) also known as the Ebola hemorrhagic fever is a very deadly infectious disease to humankind. Therefore, a safer and complementary method of diagnosis is to employ the use of an expert system in order to initiate a platform for pre-clinical treatments, thus acting as a precursor to comprehensive medical diagnosis and treatments. This work presents a design and implementation of informatics software and a knowledge-based expert system for the diagnosis, and provision of recommendations on the appropriate type of recommended treatment to the Ebola Virus Disease (EVD).In this research an Ebola fuzzy informatics system was developed for the purpose of diagnosing and providing useful recommendations to the management of the EVD in West Africa and other affected regions of the world. It also acts as a supplementary resource in providing medical advice to individuals in Ebola – ravaged countries. This aim was achieved through the following objectives: (i) gathering of facts through the conduct of a comprehensive continental survey to determine the knowledge and perception level of the public about factors responsible for the transmission of the Ebola Virus Disease (ii) develop an informatics software based on information collated from health institutions on basic diagnosis of the Ebola Virus Disease-related symptoms (iii) adopting and marrying the knowledge of fuzzy logic and expert systems in developing the informatics software. Necessary requirements were collated from the review of existing expert systems, consultation of journals and articles, and internet sources. Online survey was conducted to determine the level at which individuals are aware of the factors responsible for the transmission of the Ebola Virus Disease (EVD). The expert system developed, was designed to use fuzzy logic as its inference mechanism along with a set of rules. A knowledge base was created to help provide diagnosis on the Ebola Virus Disease (EVD). The Root Sum Square (RSS) was adopted as a fuzzy inference method. The degree of participation of each input parameter was shown using the triangular membership function and the defuzzification technique used is the Center of Gravity (CoG).The resulting software produced a user-friendly desktop-based, Windows-based, application and the tools used were explained in the results section in three (3) separate phases. First, a comprehensive online survey was conducted over a period of about 3–9 months. 100 Participants participated in the survey on the perception and knowledge analysis of different individuals about Ebola Virus Disease (EVD) transmission factors. 31% of the participants didn't know that there is presently no cure for Ebola. 28% believed that there is presently a cure for Ebola. 43% agreed that Ebola is both air-borne and water-borne, while 33% disagreed, 24% do not know. 23% believed that insects and mosquitoes can help in transmitting the Ebola Virus Disease (EVD), while 30% were completely ignorant. We noticed that ignorance was a major limiting factor among some participants.Second, a test was conducted among 45 people. Results from a comprehensive testing of the Ebinformatics software by allowing users to operate and use the software, revealed that 60% of them were satisfied, while 16% were not satisfied with the software, while 24% were indifferent. 69% of the users were in agreement that Ebinformatics was supportive, 20% disagreed, while 11% were indifferent. 67% found the software easy to use, 13% disagreed, while 20% were indifferent. Third, the output of the software, showing the various diagnosis and recommendations interfaces were presented. Recommendations were also given with respect to how the system can be extended, and further improved upon

Contributing to a student organization, such as the International Society for Computational Biology Student Council (ISCB-SC) and its Regional Student Group (RSG) program, takes time and energy. Both are scarce commodities, especially when you are trying to find your place in the world of computational biology as a graduate student. It comes as no surprise that organizing ISCB-SC-related activities sometimes interferes with day-to-day research and shakes up your priority list. However, we unanimously agree that the rewards, both in the short as well as the long term, make the time spent on these extracurricular activities more than worth it. In this article, we will explain what makes this so worthwhile: soft skills.