Amitabha Mukhopadhyay

Prof. Dr. Amitabha Mukhopadhyay

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Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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16 May 2022 in Pathogens
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Journal Article
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IAIrshad Ansari
Irshad Ansari
RBRituparna Basak
Rituparna Basak
AMAmitabha Mukhopadhyay
Amitabha Mukhopadhyay
Leishmania species are causative agents of human leishmaniasis, affecting 12 million people annually. Drugs available for leishmaniasis are toxic, and no vaccine is available. Thus, the major thrust is to identify new therapeutic targets. Leishmania is an auxotroph for heme and must acquire heme from the host for its survival. Thus, the major focus has been to understand the heme acquisition process by the parasites in the last few decades. It is conceivable that the parasite is possibly obtaining heme from host hemoprotein, as free heme is not available in the host. Current understanding indicates that Leishmania internalizes hemoglobin (Hb) through a specific receptor by a clathrin-mediated endocytic process and targets it to the parasite lysosomes via the Rab5 and Rab7 regulated endocytic pathway, where it is degraded to generate intracellular heme that is used by the parasite. Subsequently, intra-lysosomal heme is initially transported to the cytosol and is finally delivered to the mitochondria via different heme transporters. Studies using different null mutant parasites showed that these receptors and transporters are essential for the survival of the parasite. Thus, the heme acquisition process in Leishmania may be exploited for the development of novel therapeutics.

27 February 2024 in PLOS Pathogens
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Journal Article
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CSChandni Sood
Chandni Sood
JVJitender Kumar Verma
Jitender Kumar Verma
RBRituparna Basak
Rituparna Basak
AKAnjali Kapoor
Anjali Kapoor
SGSwarnima Gupta
Swarnima Gupta
AMAmitabha Mukhopadhyay
Amitabha Mukhopadhyay
Lipids stored in lipid-bodies (LBs) in host cells are potential sources of fatty acids for pathogens. However, the mechanism of recruitment of LBs from the host cells by pathogens to acquire fatty acids is not known. Here, we have found that Leishmania specifically upregulates the expression of host Rab18 and its GEF, TRAPPC9 by downregulating the expression of miR-1914-3p by reducing the level of Dicer in macrophages via their metalloprotease gp63. Our results also show that miR-1914-3p negatively regulates the expression of Rab18 and its GEF in cells. Subsequently, Leishmania containing parasitophorous vacuoles (Ld-PVs) recruit and retain host Rab18 and TRAPPC9. Leishmania infection also induces LB biogenesis in host cells and recruits LBs on Ld-PVs and acquires FLC12-labeled fatty acids from LBs. Moreover, overexpression of miR-1914-3p in macrophages significantly inhibits the recruitment of LBs and thereby suppresses the multiplication of parasites in macrophages as parasites are unable to acquire fatty acids. These results demonstrate a novel mechanism how Leishmania acquire fatty acids from LBs for their growth in macrophages.

1 January 2021 in Biochimica et Biophysica Acta (BBA) - Molecular Cell Research
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Journal Article
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RRRuchir Rastogi
Ruchir Rastogi
AKAnjali Kapoor
Anjali Kapoor
JVJitender Kumar Verma
Jitender Kumar Verma
IAIrshad Ansari
Irshad Ansari
CSChandni Sood
Chandni Sood
AMAmitabha Mukhopadhyay
Amitabha Mukhopadhyay

14 December 2020 in FEBS Letters
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Journal Article
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RRRuchir Rastogi
Ruchir Rastogi
JVJitender Kumar Verma
Jitender Kumar Verma
VSVijay Singh
Vijay Singh
GKGanga Krishnamurthy
Ganga Krishnamurthy
CSChandni Sood
Chandni Sood
AMAmitabha Mukhopadhyay
Amitabha Mukhopadhyay
Leishmania internalize hemoglobin (Hb) via a specific receptor (HbR) for their survival. To identify the Hb‐binding domain of HbR, we cloned and expressed several truncated proteins of HbR and determined their ability to bind Hb. Our findings reveal that 90% of Hb‐binding activity is retained in HbR41–80 in comparison with HbR1–471. We synthesized a 40 amino acid peptide (SSEKMKQLTMYMIHEMVEGLEGRPSTVRMLPSFVYTSDPA) corresponding to HbR41–80 and found that it specifically binds Hb. Subsequently, we found that the HbR41–80 peptide completely blocks Hb uptake in both promastigote and amastigote forms of Leishmania and, thereby, inhibits the growth of the parasite. These results demonstrate that HbR41–80 is the Hb‐binding domain of HbR, which might be used as a potential therapeutic agent to inhibit the growth of Leishmania.

15 July 2025 in Journal of Cell Science
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Journal Article
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AKAnjali Kapoor
Anjali Kapoor
JVJitender Kumar Verma
Jitender Kumar Verma
DGDeepali Goyal
Deepali Goyal
SAShruti Agarwal
Shruti Agarwal
AGAditi Gaur
Aditi Gaur
AMAmitabha Mukhopadhyay
Amitabha Mukhopadhyay
In clathrin-mediated endocytosis, the cytoplasmic domain of the receptor binds to the AP2 adaptor, which recruits clathrin to mediate endocytosis. The classical AP2 adaptor in Leishmania has not yet been characterized. Here, we identified ATP synthase epsilon (LdATPSε) subunit as a novel adaptor in Leishmania using yeast two-hybrid screening. Subsequently, we cloned and expressed LdATPSε from Leishmania and showed that LdATPSε colocalizes with LdClathrin and the hemoglobin receptor in Leishmania. We found that LdATPSε directly binds to a cargo-binding motif, ‘YLAP’, in the cytoplasmic domain of the high-affinity hemoglobin receptor, whereas it interacts with the LdClathrin terminal domain via a clathrin-binding motif, ‘LSELD’. Consequently, we showed that mutated clathrin binding box LdATPSεL133A/L136A/D137A does not bind to clathrin and fails to localize in the flagellar pocket, and its overexpression completely blocks hemoglobin internalization in Leishmania. LdATPSε−/− parasites are not viable, indicating the essential function of LdATPSε. However, hemoglobin internalization in LdATPSε+/− parasites is significantly blocked, and LdATPSε+/− parasites fail to grow in macrophages as the parasites are unable to internalize hemoglobin. Our results demonstrate that LdATPSε is a novel adaptor for clathrin in hemoglobin endocytosis in Leishmania.

10 February 2024 in Biochimica et Biophysica Acta (BBA) - Molecular Cell Research
Verified
Journal Article
Closed access
IAIrshad Ansari
Irshad Ansari
ASAmir Kumar Singh
Amir Kumar Singh
AKAnjali Kapoor
Anjali Kapoor
AMAmitabha Mukhopadhyay
Amitabha Mukhopadhyay