Deep learning on nonenhanced cardiac MRI data can detect the presence and extent of chronic myocardial infarction. This approach may have potential to reduce use of gadolinium contrast administration. Background Renal impairment is common in patients with coronary artery disease and, if severe, late gadolinium enhancement (LGE) imaging for myocardial infarction (MI) evaluation cannot be performed. Purpose To develop a fully automatic framework for chronic MI delineation via deep learning on non–contrast material–enhanced cardiac cine MRI. Materials and Methods In this retrospective single-center study, a deep learning model was developed to extract motion features from the left ventricle and delineate MI regions on nonenhanced cardiac cine MRI collected between October 2015 and March 2017. Patients with chronic MI, as well as healthy control patients, had both nonenhanced cardiac cine (25 phases per cardiac cycle) and LGE MRI examinations. Eighty percent of MRI examinations were used for the training data set and 20% for the independent testing data set. Chronic MI regions on LGE MRI were defined as ground truth. Diagnostic performance was assessed by analysis of the area under the receiver operating c...
This paper presents an automatic wearable electrocardiogram (ECG) classification and monitoring system with stacked denoising autoencoder (SDAE). We use a wearable device with wireless sensors to obtain the ECG data, and send these ECG data to a computer with Bluetooth 4.2. Then, these ECG data are classified by the automatic cardiac arrhythmia classification system. First, the ECG feature representation is learned by the SDAE with sparsity constraint. Then, the softmax regression is used to classify the ECG beats. In the fine-tuning phase, an active learning is added to improve the performance. In the active learning phase, we use the method that relies on the deep neural networks posterior probabilities to associate confidence measures to select the most informative samples. Breaking-ties and modified breaking-ties methods are used to select the most informative samples. We validate the proposed method on the well-known MIT-BIH arrhythmia database and ECG data obtained from the wearable device. We follow the recommendations of the Association for the Advancement of Medical Instrumentation for class labeling and results presentation. The results show that the classification performance of our proposed approach outperforms the most of the state-of-the-art methods.
30 August 2017 in IEEE Transactions on Medical Imaging
The motion of the common carotid artery (CCA) wall has been established to be useful in early diagnosis of atherosclerotic disease. However, tracking the CCA wall motion from ultrasound images remains a challenging task. In this paper, a nonlinear state-space approach has been developed to track CCA wall motion from ultrasound sequences. In this approach, a nonlinear state-space equation with a time-variant control signal was constructed from a mathematical model of the dynamics of the CCA wall. Then, the unscented Kalman filter (UKF) was adopted to solve the nonlinear state transfer function in order to evolve the state of the target tissue, which involves estimation of the motion trajectory of the CCA wall from noisy ultrasound images. The performance of this approach has been validated on 30 simulated ultrasound sequences and a real ultrasound dataset of 103 subjects by comparing the motion tracking results obtained in this study to those of three state-of-the-art methods and of the manual tracing method performed by two experienced ultrasound physicians. The experimental results demonstrated that the proposed approach is highly correlated with (intra-class correlation coefficient ≥ 0.9948 for the longitudinal motion and ≥ 0.9966 for the radial motion) and well agrees (the 95% confidence interval width is 0.8871 mm for the longitudinal motion and 0.4159 mm for the radial motion) with the manual tracing method on real data and also exhibits high accuracy on simulated data (0.1161 ~ 0.1260 mm). These results appear to demonstrate the effectiveness of the proposed approach for motion tracking of the CCA wall.
18 January 2023 in IEEE Transactions on Medical Imaging
Convolutional neural networks (CNNs) have made enormous progress in medical image segmentation. The learning of CNNs is dependent on a large amount of training data with fine annotations. The workload of data labeling can be significantly relieved via collecting imperfect annotations which only match the underlying ground truths coarsely. However, label noises which are systematically introduced by the annotation protocols, severely hinders the learning of CNN-based segmentation models. Hence, we devise a novel collaborative learning framework in which two segmentation models cooperate to combat label noises in coarse annotations. First, the complementary knowledge of two models is explored by making one model clean training data for the other model. Secondly, to further alleviate the negative impact of label noises and make sufficient usage of the training data, the specific reliable knowledge of each model is distilled into the other model with augmentation-based consistency constraints. A reliability-aware sample selection strategy is incorporated for guaranteeing the quality of the distilled knowledge. Moreover, we employ joint data and model augmentations to expand the usage of reliable knowledge. Extensive experiments on two benchmarks showcase the superiority of our proposed method against existing methods under annotations with different noise levels. For example, our approach can improve existing methods by nearly 3% DSC on the lung lesion segmentation dataset LIDC-IDRI under annotations with 80% noise ratio.
11 November 2019 in IEEE Transactions on Medical Imaging
Intracoronary imaging is a crucial imaging technology in coronary disease diagnosis as it visualizes the internal tissue morphologies of coronary arteries. Vessel border detection in intracoronary images (VBDI) is desired because it can help the succeeding procedures of computer-aided disease diagnosis. However, existing VDBI methods suffer from the challenge of vessel-environment variability (i.e. high intra-and inter-subject diversity of vessels and their surrounding tissues appeared in images). This challenge leads to the ineffectiveness in the vessel region representation for hand-crafted features, in the receptive field extraction for deeply-represented features, as well as performance suppression derived from clinical data limitation. To solve this challenge, we propose a novel privileged modality distillation (PMD) framework for VBDI. PMD transforms the single-input-single-task (SIST) learning problem in the single-mode VBDI to a multiple-input-multiple-task (MIMT) problem by using the privileged image modality to help the learning model in the target modality. This learns the enriched high-level knowledge with similar semantics and generalizes PMD on diversity-increased low-level image features for improving the model adaptation to diverse vessel environments. Moreover, PMD refines MIMT to SIST by distilling the learned knowledge from multiple to one modality. This eliminates the reliance on privileged modality in the test phase, and thus enables the applicability to each of different intracoronary modalities. A structure-deformable neural network is proposed as an elaborately-designed implementation of PMD. It expands a conventional SIST network structure to the MIMT structure, and then recovers it to the final SIST structure. The PMD is validated on intravascular ultrasound imaging and optical coherence tomography imaging. One modality is the target, and the other one can be considered as the privileged modality owing to their semantic relatedness. The experiments show that our PMD is effective in VBDI (e.g. the Dice index is larger than 0.95), as well as superior to six state-of-the-art VBDI methods.
15 January 2024 in IEEE Transactions on Image Processing
Limited-angle tomographic reconstruction is one of the typical ill-posed inverse problems, leading to edge divergence with degraded image quality. Recently, deep learning has been introduced into image reconstruction and achieved great results. However, existing deep reconstruction methods have not fully explored data consistency, resulting in poor performance. In addition, deep reconstruction methods are still mathematically inexplicable and unstable. In this work, we propose an iterative residual optimization network (IRON) for limited-angle tomographic reconstruction. First, a new optimization objective function is established to overcome false negative and positive artifacts induced by limited-angle measurements. We integrate neural network priors as a regularizer to explore deep features within residual data. Furthermore, the block-coordinate descent is employed to achieve a novel iterative framework. Second, a convolution assisted transformer is carefully elaborated to capture both local and long-range pixel interactions simultaneously. Regarding the visual transformer, the multi-head attention is further redesigned to reduce computational costs and protect reconstructed image features. Third, based on the relative error convergence property of the convolution assisted transformer, a mathematical convergence analysis is also provided for our IRON. Both numerically simulated and clinically collected real cardiac datasets are employed to validate the effectiveness and advantages of the proposed IRON. The results show that IRON outperforms other state-of-the-art methods.