Deborah H. Yates

Dr. Deborah H. Yates


Research Focus & Metrics

Academic Career Length

37Years (1990-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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31 July 2013 in The Clinical Respiratory Journal
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SPSilvie Prazakova
Silvie Prazakova
PTPaul S. Thomas
Paul S. Thomas
ASAlessandra Sandrini
Alessandra Sandrini
DYDeborah H. Yates
Deborah H. Yates

19 December 2011 in European Respiratory Journal
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ECEleanor A. Chapman
Eleanor A. Chapman
PTPaul S. Thomas
Paul S. Thomas
ESEmily Stone
Emily Stone
CLCraig Lewis
Craig Lewis
DYDeborah H. Yates
Deborah H. Yates
Malignant mesothelioma (MM) is a rare tumour which is difficult to diagnose in its early stages. Earlier detection of MM could potentially improve survival. Exhaled breath sampling of volatile organic compounds (VOCs) using a carbon polymer array (CPA) electronic nose recognises specific breath profiles characteristic of different diseases, and can distinguish between patients with lung cancer and controls. With MM, the potential confounding effect of other asbestos-related diseases (ARDs) needs to be considered. We hypothesised that as CPA electronic nose would distinguish patients with MM, patients with benign ARDs, and controls with high sensitivity and specificity.20 MM, 18 ARD and 42 control subjects participated in a cross-sectional, case–control study. Breath samples were analysed using the Cyranose 320 (Smiths Detection, Pasadena, CA, USA), using canonical discriminant analysis and principal component reduction.10 MM subjects created the training set. Smell prints from 10 new MM patients were distinguished from control subjects with an accuracy of 95%. Patients with MM, ARDs and control subjects were correctly identified in 88% of cases.Exhaled breath VOC profiling can accurately distinguish between patients with MM, ARDs and controls using a CPA electronic nose. This could eventually translate into a screening tool for high-risk populations.

1 April 2001 in Immunology & Cell Biology
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DYDeborah H. Yates
Deborah H. Yates

1 December 2015 in Journal of Breath Research
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JLJan Hendrik Leopold
Jan Hendrik Leopold
LBLieuwe Bos
Lieuwe Bos
PSPeter J Sterk
Peter J Sterk
MSMarcus J. Schultz
Marcus J. Schultz
NFNiki Fens
Niki Fens
AAAmeen Abu-Hanna
Ameen Abu-Hanna
Currently, many different methods are being used for pre-processing, statistical analysis and validation of data obtained by electronic nose technology from exhaled air. These various methods, however, have never been thoroughly compared. We aimed to empirically evaluate and compare the influence of different dimension reduction, classification and validation methods found in published studies on the diagnostic performance in several datasets. Our objective was to facilitate the selection of appropriate statistical methods and to support reviewers in this research area. We reviewed the literature by searching Pubmed up to the end of 2014 for all human studies using an electronic nose and methodological quality was assessed using the QUADAS-2 tool tailored to our review. Forty-six studies were evaluated regarding the range of different approaches to dimension reduction, classification and validation. From forty-six reviewed articles only seven applied external validation in an independent dataset, mostly with a case-control design. We asked their authors to share the original datasets with us. Four of the seven datasets were available for re-analysis. Published statistical methods for eNose signal analysis found in the literature review were applied to the training set of each dataset. The performance (area under the receiver operating characteristics curve (ROC-AUC)) was calculated for the training cohort (in-set) and after internal validation (leave-one-out cross validation). The methods were also applied to the external validation set to assess the external validity of the performance. Risk of bias was high in most studies due to non-random selection of patients. Internal validation resulted in a decrease in ROC-AUCs compared to in-set performance: −0.15,−0.14,−0.1,−0.11 in dataset 1 through 4, respectively. External validation resulted in lower ROC-AUC compared to internal validation in dataset 1 (−0.23) and 3 (−0.09). ROC-AUCs did not decrease in dataset 2 (+0.07) and 4 (+0.04). No single combination of dimension reduction and classification methods gave consistent results between internal and external validation sets in this sample of four datasets. This empirical evaluation showed that it is not meaningful to estimate the diagnostic performance on a training set alone, even after internal validation. Therefore, we recommend the inclusion of an external validation set in all future eNose projects in medicine.

20 June 2016 in Medical Journal of Australia
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GZGraeme Zosky
Graeme Zosky
RHRyan F Hoy
Ryan F Hoy
ESElizabeth J Silverstone
Elizabeth J Silverstone
FBFraser J Brims
Fraser J Brims
SMSusan Miles
Susan Miles
DYDeborah H. Yates
Deborah H. Yates
Action is required to mitigate the potential resurgence of an untreatable but preventable lung disease

27 December 2009 in Respirology
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ASAlessandra Sandrini
Alessandra Sandrini
DTD. Robin Taylor
D. Robin Taylor
PTPaul S. Thomas
Paul S. Thomas
DYDeborah H. Yates
Deborah H. Yates