Tomoaki Ichie

Prof. Tomoaki Ichie

Kōchi University, Kōchi, Japan
orcid

Research Focus & Metrics

Academic Career Length

26Years (2001-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
31 December 2019 in Global Change Biology
Verified
Journal Article
Open access
JKJens Kattge
Jens Kattge
GBGerhard Bönisch
Gerhard Bönisch
SDSandra Díaz
Sandra Díaz
SLSandra Lavorel
Sandra Lavorel
IPIain Colin Prentice
Iain Colin Prentice
CWChristian Wirth
Christian Wirth
Plant traits—the morphological, anatomical, physiological, biochemical and phenological characteristics of plants—determine how plants respond to environmental factors, affect other trophic levels, and influence ecosystem properties and their benefits and detriments to people. Plant trait data thus represent the basis for a vast area of research spanning from evolutionary biology, community and functional ecology, to biodiversity conservation, ecosystem and landscape management, restoration, biogeography and earth system modelling. Since its foundation in 2007, the TRY database of plant traits has grown continuously. It now provides unprecedented data coverage under an open access data policy and is the main plant trait database used by the research community worldwide. Increasingly, the TRY database also supports new frontiers of trait‐based plant research, including the identification of data gaps and the subsequent mobilization or measurement of new data. To support this development, in this article we evaluate the extent of the trait data compiled in TRY and analyse emerging patterns of data coverage and representativeness. Best species coverage is achieved for categorical traits—almost complete coverage for ‘plant growth form’. However, most traits relevant for ecology and vegetation modelling are characterized by continuous intraspecific variation and trait–environmental relationships. These traits have to be measured on individual plants in their respective environment. Despite unprecedented data coverage, we observe a humbling lack of completeness and representativeness of these continuous traits in many aspects. We, therefore, conclude that reducing data gaps and biases in the TRY database remains a key challenge and requires a coordinated approach to data mobilization and trait measurements. This can only be achieved in collaboration with other initiatives.

1 May 2015 in Ecology
Verified
Journal Article
Open access
PDF file
DFDaniel S. Falster
Daniel S. Falster
RDRemko A. Duursma
Remko A. Duursma
MIMasae I. Ishihara
Masae I. Ishihara
DBDiego R. Barneche
Diego R. Barneche
RFRichard G. FitzJohn
Richard G. FitzJohn
RYRobert A. York
Robert A. York
Understanding how plants are constructed—i.e., how key size dimensions and the amount of mass invested in different tissues varies among individuals—is essential for modeling plant growth, carbon stocks, and energy fluxes in the terrestrial biosphere. Allocation patterns can differ through ontogeny, but also among coexisting species and among species adapted to different environments. While a variety of models dealing with biomass allocation exist, we lack a synthetic understanding of the underlying processes. This is partly due to the lack of suitable data sets for validating and parameterizing models. To that end, we present the Biomass And Allometry Database (BAAD) for woody plants. The BAAD contains 259 634 measurements collected in 176 different studies, from 21 084 individuals across 678 species. Most of these data come from existing publications. However, raw data were rarely made public at the time of publication. Thus, the BAAD contains data from different studies, transformed into standard units and variable names. The transformations were achieved using a common workflow for all raw data files. Other features that distinguish the BAAD are: (i) measurements were for individual plants rather than stand averages; (ii) individuals spanning a range of sizes were measured; (iii) plants from 0.01–100 m in height were included; and (iv) biomass was estimated directly, i.e., not indirectly via allometric equations (except in very large trees where biomass was estimated from detailed sub‐sampling). We included both wild and artificially grown plants. The data set contains the following size metrics: total leaf area; area of stem cross‐section including sapwood, heartwood, and bark; height of plant and crown base, crown area, and surface area; and the dry mass of leaf, stem, branches, sapwood, heartwood, bark, coarse roots, and fine root tissues. We also report other properties of individuals (age, leaf size, leaf mass per area, wood density, nitrogen content of leaves and wood), as well as information about the growing environment (location, light, experimental treatment, vegetation type) where available. It is our hope that making these data available will improve our ability to understand plant growth, ecosystem dynamics, and carbon cycling in the world's vegetation.

1 July 2006 in Tree Physiology
Verified
Journal Article
Open access
PDF file
TKTanaka Kenzo
Tanaka Kenzo
TITomoaki Ichie
Tomoaki Ichie
YWYoko Watanabe
Yoko Watanabe
RYReiji Yoneda
Reiji Yoneda
INIkuo Ninomiya
Ikuo Ninomiya
TKTakayoshi Koike
Takayoshi Koike
Variations in leaf photosynthetic, morphological and biochemical properties with increasing plant height from seedlings to emergent trees were investigated in five dipterocarp species in a Malaysian tropical rain forest. Canopy openness increased significantly with tree height. Photosynthetic properties, such as photosynthetic capacity at light saturation, light compensation point, maximum rate of carboxylation and maximum rate of photosynthetic electron transport, all increased significantly with tree height. Leaf morphological and biochemical traits, such as leaf mass per area, palisade layer thickness, nitrogen concentration per unit area, chlorophyll concentration per unit dry mass and chlorophyll to nitrogen ratio, also changed significantly with tree height. Leaf properties had simple and significant relationships with tree height, with few intra- and interspecies differences. Our results therefore suggest that the photosynthetic capacity of dipterocarp trees depends on tree height, and that the trees adapt to the light environment by adjusting their leaf morphological and biochemical properties. These results should aid in developing models that can accurately estimate carbon dioxide flux and biomass production in tropical rain forests.

16 November 2017 in Ecological Research
Verified
Journal Article
Open access
PDF file
KFKazumichi Fujii
Kazumichi Fujii
MSMakoto Shibata
Makoto Shibata
KKKaoru Kitajima
Kaoru Kitajima
TITomoaki Ichie
Tomoaki Ichie
KKKanehiro Kitayama
Kanehiro Kitayama
Benjamin L TurnerBenjamin L Turner
Benjamin L Turner
Tropical forests are characterized by high biodiversity and aboveground biomass growing on strongly weathered soils. However, the distribution of plant species and soils are highly variable even within a tropical region. This paper reviews existing and novel knowledge on soil genesis, plant and microbial physiology, and biogeochemistry. Typically, forests in Southeast Asia are dominated by dipterocarps growing on acidic Ultisols from relatively young parent material. In the Neotropics and Africa, forests contain abundant legume trees growing on Oxisols developed in the older parent materials on stable continental shields. In Southeast Asia, the removal of base cations from the surface soil due to leaching and uptake by dipterocarp trees result in intensive acidification and accumulation of exchangeable Al 3+ , which is toxic to most plants. Nutrient mining by ectomycorrhizal fungi and efficient allocation within tree organs can supply phosphorus (P) for reproduction (e.g., mast fruiting) even on P‐limited soils. In the Neotropics and Africa, nitrogen (N) fixation by legume trees can ameliorate N or P limitation but excess N can promote acidification through nitrification. Biological weathering [e.g., plant silicon (Si) cycling] and leaching can lead to loss of Si from soil. The resulting accumulation of Al and Fe oxides in Oxisols that can reduce P solubility through sorption and lead to limitation of P relative to N. Thus, geographical variation in geology and plant species drives patterns of soil weathering and niche differentiation at the global scale in tropical forests.

1 July 2009 in Journal of Tropical Ecology
Verified
Journal Article
Closed access
PDF file
TKTanaka Kenzo
Tanaka Kenzo
TITomoaki Ichie
Tomoaki Ichie
DHDaisuke Hattori
Daisuke Hattori
TITakao Itioka
Takao Itioka
CHChihiro Handa
Chihiro Handa
INIkuo Ninomiya
Ikuo Ninomiya
We developed allometric relationships between tree size parameters (stem diameter at breast height (dbh), at ground surface (D0) and tree height) and leaf, stem, small-root (diameter <5 mm) and total root biomass in various tropical secondary-forest trees in Sarawak, Malaysia. In total, 136 individuals from 23 species were harvested to measure above-ground parts. Root systems of 77 individuals of 16 species were also excavated. The coefficients of correlation for the obtained allometric relationships between tree diameter and plant-part biomass showed high values, ranging from 0.83 to 0.99. In addition, there were few interspecific differences in relationships for all biomass parts, except for leaves. We also found relatively high coefficients of allometric relationships between tree height and plant-part biomass ranging from 0.83 to 0.94. Comparison of above- and below-ground biomass equations for various tropical rainforests implies that our allometric equations differ largely from the equations for tropical primary forests. Thus, choosing both above- and below-ground allometric equations for biomass estimation in tropical secondary forests of South-East Asia requires careful consideration of their suitability.

2 November 2014 in Oecologia
Verified
Journal Article
Closed access
PDF file
TKTanaka Kenzo
Tanaka Kenzo
YIYuta Inoue
Yuta Inoue
MYMitsunori Yoshimura
Mitsunori Yoshimura
MYMegumi Yamashita
Megumi Yamashita
ATAyumi Tanaka-Oda
Ayumi Tanaka-Oda
TITomoaki Ichie
Tomoaki Ichie