Julian Santiago Ruiz-Castellanos

Dr. Julian Santiago Ruiz-Castellanos


Research Focus & Metrics

Academic Career Length

5Years (2022-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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28 March 2023 in Antibiotics
Verified
Journal Article
Open access
PDF file
DHDaniela Forero Hurtado
Daniela Forero Hurtado
ZCZayda Lorena Corredor-Rozo
Zayda Lorena Corredor-Rozo
JRJulian Santiago Ruiz-Castellanos
Julian Santiago Ruiz-Castellanos
Ricaurte Alejandro Marquez-OrtizRicaurte Alejandro Marquez-Ortiz
Ricaurte Alejandro Marquez-Ortiz
DADeisy Abril
Deisy Abril
JEJavier Escobar-Perez
Javier Escobar-Perez
The dissemination of blaKPC-harboring Pseudomonas aeruginosa (KPC-Pa) is considered a serious public health problem. This study provides an overview of the epidemiology of these isolates to try to elucidate novel mobilization platforms that could contribute to their worldwide spread. A systematic review in PubMed and EMBASE was performed to find articles published up to June 2022. In addition, a search algorithm using NCBI databases was developed to identify sequences that contain possible mobilization platforms. After that, the sequences were filtered and pair-aligned to describe the blaKPC genetic environment. We found 691 KPC-Pa isolates belonging to 41 different sequence types and recovered from 14 countries. Although the blaKPC gene is still mobilized by the transposon Tn4401, the non-Tn4401 elements (NTEKPC) were the most frequent. Our analysis allowed us to identify 25 different NTEKPC, mainly belonging to the NTEKPC-I, and a new type (proposed as IVa) was also observed. This is the first systematic review that consolidates information about the behavior of the blaKPC acquisition in P. aeruginosa and the genetic platforms implied in its successful worldwide spread. Our results show high NTEKPC prevalence in P. aeruginosa and an accelerated dynamic of unrelated clones. All information collected in this review was used to build an interactive online map.

15 June 2022 in Medical Sciences Forum
Verified
Conference Paper
Open access
PDF file
JRJulian Santiago Ruiz-Castellanos
Julian Santiago Ruiz-Castellanos
Ricaurte Alejandro Marquez-OrtizRicaurte Alejandro Marquez-Ortiz
Ricaurte Alejandro Marquez-Ortiz
DADeisy Abril
Deisy Abril
DHDaniela Forero Hurtado
Daniela Forero Hurtado
GTGinna Tíjaro
Ginna Tíjaro
NVNatasha Vanegas
Natasha Vanegas
The multi-resistance presented by P. aeruginosa has greatly increased due to the presence of genes for carbapenemases such as blaKPC. The dissemination of this gene has been associated with the Tn4401, the main mobile genetic element that carries blaKPC in its structure. However, some non-Tn4401 elements (NTEKPC) associated with blaKPC have been found in different bacteria. Here, we characterized in silico and in vitro blaKPC-associated elements in P. aeruginosa. To identify these elements, a search algorithm was performed using NCBI databases; sequences were filtered and pair-aligned to describe the blaKPC genetic environment. Additionally, a PCR-based strategy was designed to target Tn4401 variants and NTEKPC groups and assessed in 61 Colombian clinical isolates. Using an in silico approach, 51 blaKPC-positive entries longer than 3kb (in the blaKPC upstream region) were found; from these, 72.7% carried an NTEKPC. On the PCR assay, Tn4401 was the most frequent element among the P. aeruginosa in Colombia. However, NTEKPC-IIf was presented on 29.5% of the isolates, in different genetic lineages and at least in four hospitals. These results show high NTEKPC prevalence in P. aeruginosa.