The molecular mechanisms of plant recognition, colonization, and nutrient exchange between diazotrophic endophytes and plants are scarcely known. Herbaspirillum seropedicae is an endophytic bacterium capable of colonizing intercellular spaces of grasses such as rice and sugar cane. The genome of H. seropedicae strain SmR1 was sequenced and annotated by The Paraná State Genome Programme—GENOPAR. The genome is composed of a circular chromosome of 5,513,887 bp and contains a total of 4,804 genes. The genome sequence revealed that H. seropedicae is a highly versatile microorganism with capacity to metabolize a wide range of carbon and nitrogen sources and with possession of four distinct terminal oxidases. The genome contains a multitude of protein secretion systems, including type I, type II, type III, type V, and type VI secretion systems, and type IV pili, suggesting a high potential to interact with host plants. H. seropedicae is able to synthesize indole acetic acid as reflected by the four IAA biosynthetic pathways present. A gene coding for ACC deaminase, which may be involved in modulating the associated plant ethylene-signaling pathway, is also present. Genes for hemagglutinins/hemolysins/adhesins were found and may play a role in plant cell surface adhesion. These features may endow H. seropedicae with the ability to establish an endophytic life-style in a large number of plant species. In this work we describe the genome of H. seropedicae SmR1, a bacterium capable of fixing nitrogen and promoting the growth of important plant crops such as maize, rice, and sugar cane. Several investigations have shown that H. seropedicae supplies fixed nitrogen to the associated plant and increases grain productivity up to 50%. In the genome of H. seropedicae, we identified all the genes involved in the nitrogen fixation process and its regulation and, in addition, genes potentially involved in the establishment of efficient interaction with the host plant. Our analyses also revealed that this bacterium has a highly versatile metabolism capable of synthesizing and degrading a large number of organic and inorganic compounds. We believe that the knowledge of the genome of this bacterium will direct research to a better understanding of this important endophytic organism and allow the construction of new strains with enhanced agronomic efficiency.

Transgenic Cantaloupe Charentais melons ( Cucumis melo var. cantalupensis Naud. `Védrantais') exhibiting strong inhibition of ethylene production were used as a model to discriminate between ethylene-regulated and ethylene-independent ripening pathways. Compared to wild-type fruit, transgenic fruit did not undergo significant yellowing of the rind and softening of the flesh. However, these effects were completely reversed by treating transgenic fruit with 50 μL·L ^-1 exogenous ethylene. Pigmentation of the flesh occurred early before the onset of the climacteric and was thus unaffected by ethylene inhibition in transgenic fruit. Total soluble solids accumulated at the same rate in both types of fruit until 38 days after pollination when wild-type fruit abscissed. However, as ethylene-inhibited fruit failed to develop a peduncular abscission zone, they remained attached to the plant and accumulated higher amounts of sugars, mainly sucrose. Harvesting transgenic fruit resulted in a small but significant increase of internal ethylene associated with softening of the flesh.

O maracujá (Passiflora edulis) é originário da América Tropical, muito cultivado no Brasil, rico em vitamina C, cálcio e fósforo. Cascas e sementes de maracujá, provenientes do processo de corte e extração da fruta para obtenção do suco, são ainda, atualmente, em grande parte descartadas. Como este descarte representa inúmeras toneladas, agregar valor a estes subprodutos é de interesse econômico, científico e tecnológico. Neste trabalho, realizou-se um estudo para caracterizar e verificar um melhor aproveitamento das sementes excedentes do processamento do suco do maracujá na alimentação humana. Procedeu-se, para tanto, à separação das partes da fruta, com posterior quantificação gravimétrica. As sementes obtidas foram secas em estufa, e posteriormente moídas para a obtenção de um farelo. O óleo do farelo obtido foi extraído em soxhlet e caracterizado através da metodologia oficial da AOCS (1995). O farelo desengordurado obtido foi também caracterizado por métodos físico-químicos, através da determinação do teor de umidade, proteínas, lipídeos, fibras, cinzas e carboidratos por metodologia oficial AOAC (1984). O óleo extraído das sementes apresentou elevado teor de ácidos graxos insaturados (87,54%), com predominância do ácido linoléico, com índice de iodo de 136,5g I2/100g. O farelo desengordurado obtido apresentou teor da 10,53% de umidade; 15,62% de proteínas; 0,68% de lipídeos; 1,8% de cinzas, um elevado teor de fibras de 58,98 e 12,39% de carboidratos.

Background: The non-climacteric ‘Yellow’ melon (Cucumis melo, inodorus group) is an economically important crop and its quality is mainly determined by the sugar content. Thus, knowledge of sugar metabolism and its related pathways can contribute to the development of new field management and post-harvest practices, making it possible to deliver better quality fruits to consumers. Results: The RNA-seq associated with RT-qPCR analyses of four maturation stages were performed to identify important enzymes and pathways that are involved in the ripening profile of non-climacteric ‘Yellow’ melon fruit focusing on sugar metabolism. We identified 895 genes 10 days after pollination (DAP)-biased and 909 genes 40 DAP-biased. The KEGG pathway enrichment analysis of these differentially expressed (DE) genes revealed that ‘hormone signal transduction’, ‘carbon metabolism’, ‘sucrose metabolism’, ‘protein processing in endoplasmic reticulum’ and ‘spliceosome’ were the most differentially regulated processes occurring during melon development. In the sucrose metabolism, five DE genes are up-regulated and 12 are down-regulated during fruit ripening. Conclusions: The results demonstrated important enzymes in the sugar pathway that are responsible for the sucrose content and maturation profile in non-climacteric ‘Yellow’ melon. New DE genes were first detected for melon in this study such as invertase inhibitor LIKE 3 (CmINH3), trehalose phosphate phosphatase (CmTPP1) and trehalose phosphate synthases (CmTPS5, CmTPS7, CmTPS9). Furthermore, the results of the protein-protein network interaction demonstrated general characteristics of the transcriptome of young and full-ripe melon and provide new perspectives for the understanding of ripening.

Strawberry is the most studied nonclimacteric fruit for understanding the role ethylene has in ripening regulation. However, previous studies on the effects of ethylene on strawberry ripening were conducted with detached fruit. Thus, the aim of this work was to determine the effect of ethylene and the ethylene-action inhibitor 1-methylcyclopropene (1-MCP) applied at different developmental stages on important physical-chemical attributes of ripe ‘Albion’ strawberry. Fruit at four developmental stages that remained attached to the plant were dipped in one of three treatment solutions (Ethephon, 1-methylcyclopropene, and water), plus one absolute control that received no dip. Following treatment, when immature fruit were fully red or 24 h after treatment for red-treated fruit, strawberry fruit were assessed for physicochemical properties (mass, length, diameter, firmness, color, titratable acidity, soluble solids, pH, total phenolics, sugar, organic acid, amino acid, and volatile composition). The days following treatment required for fruit to ripen were also recorded. Treatments did not affect the rate of ripening nor fruit color, titratable acidity, pH, soluble solids, total phenolics, sugars, or organic acids of ripe fruit. Ethephon affected fruit mass, diameter, length, firmness, anthocyanins, amino acids, and volatiles, but these effects were dependent on fruit developmental stage at which the treatment was applied. When green fruit were treated with ethephon, ripe fruit had larger diameter and mass. Ethephon treatment of white fruit resulted in ripe fruit having greater anthocyanin content. Treatment of pink fruit resulted in ripe fruit having smaller diameter, length, and mass and greater firmness. Treatment of red fruit with ethephon altered fruit volatile composition, increasing concentrations of ethyl- and acetate-esters, which were reduced by the 1-MCP treatment. Ethephon treatment increased concentrations of 11 of the 19 free amino acids measured in ripe fruit with treatment of green and white fruit having the greatest effect. A total of 41 volatile compounds had significant correlations with 14 amino acids. While ethylene did not stimulate typical ripening of strawberry fruit, it does appear to alter fruit development and metabolism. The physiological effects of ethylene on strawberry fruit appear to depend on the developmental stage of the fruit.