Li Fan

Dr. Li Fan


Research Focus & Metrics

Academic Career Length

23Years (2004-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
19 March 2015 in PLOS ONE
Verified
Journal Article
Open access
PDF file
XSXiao-Ye Shen
Xiao-Ye Shen
TLTong Li
Tong Li
SCShuang Chen
Shuang Chen
LFLi Fan
Li Fan
JGJian Gao
Jian Gao
CHCheng-Lin Hou
Cheng-Lin Hou
Shiraia bambusicola P. Henn. is a pathogenic fungus of bamboo, and its fruiting bodies are regarded as folk medicine. We determined and analyzed its complete mitochondrial DNA sequence (circular DNA molecule of 39,030 bp, G + C content of 25.19%). It contains the typical genes encoding proteins involved in electron transport and coupled oxidative phosphorylation (nad1-6 and nad4L, cob and cox1-3), one ATP synthase subunit (atp6), 4 hypothetical proteins, and two genes for large and small rRNAs (rnl and rns). There is a set of 32 tRNA genes comprising all 20 amino acids, and these genes are evenly distributed on the two strands. Phylogenetic analyses based on concatenated mitochondrial proteins indicated that S. bambusicola clustered with members of the order Pleosporales, which is in agreement with previous results. The gene arrangements of Dothideomycetes species contained three regions of gene orders partitioned in their mitochondrial genomes, including block 1 (nad6-atp6), block 2 (nad1-cox3) and block 3 (genes around rns). S. bambusicola displayed unique special features that differed from the other Pleosporales species, especially in the coding regions around rns (trnR-trnY). Moreover, a comparison of gene orders in mitochondrial genomes from Pezizomycotina revealed that although all encoded regions are located on the same strand in most Pezizomycotina mtDNAs, genes from Dothideomycetes species had different orientations, as well as diverse positions and colocalization of genes (such as cox3, cox1-cox2 and nad2–nad3); these distinctions were regarded as class-specific features. Interestingly, two incomplete copies of the atp6 gene were found on different strands of the mitogenomic DNA, a finding that has not been observed in the other analyzed fungal species. In our study, mitochondrial genomes from Dothideomycetes species were comprehensively analyzed for the first time, including many species that have not appeared in previous reports.

2 March 2022 in Journal of Fungi
Verified
Journal Article
Open access
PDF file
NMNing Mao
Ning Mao
YXYu-Yan Xu
Yu-Yan Xu
TZTao-Yu Zhao
Tao-Yu Zhao
JLJing-Chong Lv
Jing-Chong Lv
LFLi Fan
Li Fan
Within the family Inocybaceae, many species of Mallocybe and Pseudosperma have been reported, but there are only a few reports on these two genera from north China. In this study, six collections of Mallocybe and 11 collections of Pseudosperma were studied by morphological and phylogenetic methods. Phylogenetic analyses based on sequence data from three or two different loci (ITS, LSU, and rpb2 for Mallocybe; ITS and LSU for Pseudosperma) are performed to infer species relationships within genera Mallocybe and Pseudosperma, respectively. Results indicate that eight species of Mallocybe and Pseudosperma are found in Shanxi province, north China; two new species of Mallocybe, M. depressa and M. picea, are described. Overall, six species belong to Pseudosperma, of which three are new: P. gilvum, P. laricis and P. pseudoniveivelatum.

8 December 2020 in Phytotaxa
Verified
Journal Article
Closed access
PDF file
YSYang Shen
Yang Shen
LFLi Fan
Li Fan
Guepinia alba sp. nov. and G. shanxiense sp. nov. are described and illustrated from Northern China in this paper. Morphologically, G. alba is distinguished from other Guepinia species by whitish basidiomata and 4-spored basidia while G. shanxiense is diagnosed by reddish orange basidiomata and ellipsoid to oblong ellipsoid basidiospores. Molecular phylogenetic analyses based on ITS and nrLSU sequences support the establishment of the two new species.


24 November 2022 in Construction and Building Materials
Verified
Journal Article
Closed access
Peng LiPeng Li
Peng Li
TYTao Yang
Tao Yang
PMPengfei Ma
Pengfei Ma
XFXiaojing Fei
Xiaojing Fei
LFLi Fan
Li Fan
PZPeizhi Zhuang
Peizhi Zhuang

1 January 2011 in Mycotaxon
Verified
Journal Article
Closed access
LFLi Fan
Li Fan
JCJin-Zhong Cao
Jin-Zhong Cao
YLYan-Yun Liu
Yan-Yun Liu
YLYu Li
Yu Li