Kseniya Trutneva

Dr. Kseniya Trutneva

orcid

Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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20 May 2021 in Pathogens
Verified
Journal Article
Open access
PDF file
ABArtem Blagodatski
Artem Blagodatski
KTKseniya Trutneva
Kseniya Trutneva
OGOlga Glazova
Olga Glazova
OMOlga Mityaeva
Olga Mityaeva
LSLiudmila Shevkova
Liudmila Shevkova
PVPavel Volchkov
Pavel Volchkov
Avian influenza is one of the largest known threats to domestic poultry. Influenza outbreaks on poultry farms typically lead to the complete slaughter of the entire domestic bird population, causing severe economic losses worldwide. Moreover, there are highly pathogenic avian influenza (HPAI) strains that are able to infect the swine or human population in addition to their primary avian host and, as such, have the potential of being a global zoonotic and pandemic threat. Migratory birds, especially waterfowl, are a natural reservoir of the avian influenza virus; they carry and exchange different virus strains along their migration routes, leading to antigenic drift and antigenic shift, which results in the emergence of novel HPAI viruses. This requires monitoring over time and in different locations to allow for the upkeep of relevant knowledge on avian influenza virus evolution and the prevention of novel epizootic and epidemic outbreaks. In this review, we assess the role of migratory birds in the spread and introduction of influenza strains on a global level, based on recent data. Our analysis sheds light on the details of viral dissemination linked to avian migration, the viral exchange between migratory waterfowl and domestic poultry, virus ecology in general, and viral evolution as a process tightly linked to bird migration. We also provide insight into methods used to detect and quantify avian influenza in the wild. This review may be beneficial for the influenza research community and may pave the way to novel strategies of avian influenza and HPAI zoonosis outbreak monitoring and prevention.

8 September 2016 in FEMS Microbiology Letters
Verified
Journal Article
Open access
PDF file
VNV D Nikitushkin
V D Nikitushkin
MSMargarita Shleeva
Margarita Shleeva
AZAlexander Zinin
Alexander Zinin
KTKseniya Trutneva
Kseniya Trutneva
DOD N Ostrovsky
D N Ostrovsky
AKA S Kaprelyants
A S Kaprelyants
Upon transition of Mycobacterium smegmatis into the dormant state, accumulation of a dark brown fluorescent pigment was observed. This pigment gave bright red fluorescence in both cells and the culture medium. Based on 1H-NMR, MALDI and UV spectra, the fluorescent compounds, extracted from the culture medium as well as from the dormant cells, were concluded to be a mixture of free coproporphyrin III and uroporphyrin III and their corresponding methyl esters. A possible significance of porphyrin pigment accumulation in the dormant cells is discussed.

20 January 2023 in Vaccines
Verified
Journal Article
Open access
PDF file
ADAndrei A Deviatkin
Andrei A Deviatkin
RSRuslan Simonov
Ruslan Simonov
KTKseniya Trutneva
Kseniya Trutneva
AMAnna Maznina
Anna Maznina
ASAnastasiia Soroka
Anastasiia Soroka
PVPavel Volchkov
Pavel Volchkov
Recently, the mRNA platform has become the method of choice in vaccine development to find new ways to fight infectious diseases. However, this approach has shortcomings, namely that mRNA vaccines require special storage conditions, which makes them less accessible. This instability is due to the fact that the five-prime and three-prime ends of the mRNA are a substrate for the ubiquitous exoribonucleases. To address the problem, circular mRNAs have been proposed for transgene delivery as they lack these ends. Notably, circular RNAs do not have a capped five-prime end, which makes it impossible to initiate translation canonically. In this review, we summarize the current knowledge on cap-independent translation initiation methods and discuss which approaches might be most effective in developing vaccines and other biotechnological products based on circular mRNAs.

30 April 2022 in Vaccines
Verified
Journal Article
Open access
PDF file
ADAndrei A Deviatkin
Andrei A Deviatkin
RSRuslan Simonov
Ruslan Simonov
KTKseniya Trutneva
Kseniya Trutneva
AMAnna Maznina
Anna Maznina
EKElena M. Khavina
Elena M. Khavina
PVPavel Volchkov
Pavel Volchkov
The seasonal flu vaccine is, essentially, the only known way to prevent influenza epidemics. However, this approach has limited efficacy due to the high diversity of influenza viruses. Several techniques could potentially overcome this obstacle. A recent first-in-human study of a chimeric hemagglutinin-based universal influenza virus vaccine demonstrated promising results. The coronavirus pandemic triggered the development of fundamentally new vaccine platforms that have demonstrated their effectiveness in humans. Currently, there are around a dozen messenger RNA and self-amplifying RNA flu vaccines in clinical or preclinical trials. However, the applicability of novel approaches for a universal influenza vaccine creation remains unclear. The current review aims to cover the current state of this problem and to suggest future directions for RNA-based flu vaccine development.

10 May 2014 in Plant and Soil
Verified
Journal Article
Closed access
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SASvetlana A. Alen’kina
Svetlana A. Alen’kina
VBVladimir A. Bogatyrev
Vladimir A. Bogatyrev
LMLarisa Y. Matora
Larisa Y. Matora
MSMarina K. Sokolova
Marina K. Sokolova
MCMarina P. Chernyshova
Marina P. Chernyshova
VNValentina E. Nikitina
Valentina E. Nikitina

4 September 2018 in Frontiers in Microbiology
Verified
Journal Article
Open access
PDF file
KTKseniya Trutneva
Kseniya Trutneva
MSMargarita Shleeva
Margarita Shleeva
VNVadim Nikitushkin
Vadim Nikitushkin
GDGalina Demina
Galina Demina
AKArseny Kaprelyants
Arseny Kaprelyants
Mycobacteria are able to form dormant cells, which survive for a long time without multiplication. The molecular mechanisms behind prolonged survival of dormant cells are not fully described. In particular, little information is known on biochemical processes which might take place in cells under dormancy. To gain insight into this problem, Mycobacterium smegmatis cells in deep dormant state were obtained after gradual acidification of the growth medium in prolonged stationary phase followed by 1 month of storage at room temperature. Such cells were characterized by low metabolic activity, including respiration, resistance to antibiotics, and altered morphology. The protein composition of cytoplasm and membrane fractions obtained from active and dormant cells were compared by 2D electrophoresis. Almost half of the proteins found in the proteome of dormant cells were absent in that of active cells. This result differs significantly from published results obtained in other studies employing different models of mycobacterium dormancy. This discrepancy could be explained by a deeper dormancy developed in the present model. A feature of a “dormant proteome” is high representation of enzymes involved in glycolysis and defense systems that inactivate or detoxify reactive oxygen and nitrogen species, aldehydes, and oxidized lipids. Dormant mycobacteria are enriched by degradative enzymes, which could eliminate damaged molecules, or the products of such degradation could be reutilized by the cell during prolonged storage. We suggest that some enzymes in dormant cells are inactive, having been used upon transition to the dormant state, or proteins stored in dormant cells for further cell reactivation. At the same time, some proteins could be functional and play roles in maintenance of cell metabolism, albeit at a very slow rate. This study provides a clue as to which biochemical processes could be active under dormancy to ensure long-term viability of dormant mycobacteria.