This paper introduces a self-linking invariant for virtual knots and links, and relates this invariant to a state model called the binary bracket, and to a class of coloring problems for knots and links that include classical coloring problems for cubic g

This paper gives a new method for converting virtual knots and links to virtual braids. Indeed, the braiding method given here is quite general and applies to all the categories in which braiding can be accomplished. This includes the braiding of classica

In this paper we introduce a method that offers a detailed overview of the entanglement of an open protein chain. Further, we present a purely topological model for classifying open protein chains by also taking into account any bridge involving the backbone. To this end, we implemented the concepts of planar knotoids and bonded knotoids. We show that the planar knotoids technique provides more refined information regarding the knottedness of a protein when compared to established methods in the literature. Moreover, we demonstrate that our topological model for bonded proteins is robust enough to distinguish all types of lassos in proteins.