S. Patricia Becerra

Dr. S. Patricia Becerra


Research Focus & Metrics

Academic Career Length

24Years (2003-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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14 March 2013 in Nature Reviews Cancer
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Journal Article
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SBS. Patricia Becerra
S. Patricia Becerra
VNVicente Notario
Vicente Notario

1 February 2004 in Experimental Eye Research
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Journal Article
Closed access
SBS. Patricia Becerra
S. Patricia Becerra
RFRobert N. Fariss
Robert N. Fariss
YWYan Q. Wu
Yan Q. Wu
Luis M MontuengaLuis M Montuenga
Luis M Montuenga
PWPaul Wong
Paul Wong
BPBruce A. Pfeffer
Bruce A. Pfeffer

1 May 2006 in Experimental Eye Research
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Journal Article
Closed access
SBS. Patricia Becerra
S. Patricia Becerra

1 August 2013 in Journal of Biological Chemistry
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Journal Article
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PSPreeti Subramanian
Preeti Subramanian
SLSilvia Locatelli-Hoops
Silvia Locatelli-Hoops
JKJason Kenealey
Jason Kenealey
JDJacqueline DesJardin
Jacqueline DesJardin
LNLuigi Notari
Luigi Notari
SBS. Patricia Becerra
S. Patricia Becerra
The extracellular pigment epithelium-derived factor (PEDF) displays retina survival activity by interacting with receptor proteins on cell surfaces. We have previously reported that PEDF binds and stimulates PEDF receptor (PEDF-R), a transmembrane phospholipase. However, the PEDF binding site of PEDF-R and its involvement in survival activity have not been identified. The purpose of this work is to identify a biologically relevant ligand-binding site on PEDF-R. PEDF bound the PEDF-R ectodomain L4 (Leu159–Met325) with affinity similar to the full-length PEDF-R (Met1–Leu504). Binding assays using synthetic peptides spanning L4 showed that PEDF selectively bound E5b (Ile193–Leu232) and P1 (Thr210–Leu249) peptides. Recombinant C-terminal truncated PEDF-R4 (Met1–Leu232) and internally truncated PEDF-R and PEDF-R4 (ΔHis203–Leu232) retained phospholipase activity of the full-length PEDF-R. However, PEDF-R polypeptides without the His203–Leu232 region lost the PEDF affinity that stimulated their enzymatic activity. Cell surface labeling showed that PEDF-R is present in the plasma membranes of retina cells. Using siRNA to selectively knock down PEDF-R in retina cells, we demonstrated that PEDF-R is essential for PEDF-mediated cell survival and antiapoptotic activities. Furthermore, preincubation of PEDF with P1 and E5b peptides blocked the PEDF·PEDF-R-mediated retina cell survival activity, implying that peptide binding to PEDF excluded ligand-receptor interactions on the cell surface. Our findings establish that PEDF-R is required for the survival and antiapoptotic effects of PEDF on retina cells and has determinants for PEDF binding within its L4 ectodomain that are critical for enzymatic stimulation.

1 March 2010 in Investigative Ophthalmology & Visual Science
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JAJuan Amaral
Juan Amaral
SBS. Patricia Becerra
S. Patricia Becerra
Purpose.: Pigment epithelium-derived factor (PEDF) is a serpin with antiangiogenic properties. Previously, the authors showed that PEDF injected into the subconjunctiva reaches the choroid. Here, they examined the effects of PEDF polypeptide fragments on vessel sprouting and on choroidal neovascularization (CNV) after subconjunctival administration. Methods.: Recombinant human PEDF (rhuPEDF) was cleaved at its serpin-exposed loop by limited chymotrypsin proteolysis. Synthetic PEDF peptides 34-mer (Asp44-Asn77) and 44-mer (Val78-Thr121) were used. Ex vivo chick aortic vessel sprouting assays were performed. CNV was induced in rats by laser injury of Bruch's membrane. Daily subconjunctival injections (0.01–10 pmol/d protein) were performed for 5 days starting at day of injury or at the seventh day after injury. New vessel volumes were quantified using optical sections of choroid/RPE flat-mounts labeled with isolectin-Ib4. PEDF distribution was evaluated by immunofluorescence of choroid/RPE/retina cross-sections. Results.: Full-length rhuPEDF, cleaved rhuPEDF, or peptide 34-mer exhibited ex vivo antiangiogenic activity, but peptide 44-mer was inefficient. PEDF immunostaining around CNV lesions diminished after laser injury. Subconjunctival administration of rhuPEDF or 34-mer at 0.1 pmol/d decreased CNV lesion volumes by 52% and 47%, respectively, whereas those of 44-mer were similar to vehicle injections. Doses of 0.1 and 1 pmol/d rhuPEDF decreased fully developed CNV complex volumes by 45% and 50%, respectively, compared with vehicle injections. Conclusions.: A functional region for the inhibition of vessel sprouting and CNV resides within the 34-mer region of PEDF. Furthermore, subconjunctival administration of optimal range dosages of rhuPEDF or 34-mer can suppress and regress rat CNV lesions, demonstrating that these agents reach the choroid/RPE complex as functionally active molecules.

19 April 2010 in The FEBS Journal
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Journal Article
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LNLuigi Notari
Luigi Notari
NANaokatu Arakaki
Naokatu Arakaki
DMDavid Mueller
David Mueller
SMScott Meier
Scott Meier
JAJuan Amaral
Juan Amaral
SBS. Patricia Becerra
S. Patricia Becerra
Pigment epithelium‐derived factor (PEDF), a potent blocker of angiogenesis in vivo, and of endothelial cell migration and tubule formation, binds with high affinity to an as yet unknown protein on the surfaces of endothelial cells. Given that protein fingerprinting suggested a match of a ∼ 60 kDa PEDF‐binding protein in bovine retina with Bos taurus F1‐ATP synthase β‐subunit, and that F1Fo‐ATP synthase components have been identified recently as cell‐surface receptors, we examined the direct binding of PEDF to F1. Size‐exclusion ultrafiltration assays showed that recombinant human PEDF formed a complex with recombinant yeast F1. Real‐time binding as determined by surface plasmon resonance demonstrated that yeast F1 interacted specifically and reversibly with human PEDF. Kinetic evaluations revealed high binding affinity for PEDF, in agreement with PEDF affinities for endothelial cell surfaces. PEDF blocked interactions between F1 and angiostatin, another antiangiogenic factor, suggesting overlapping PEDF‐binding and angiostatin‐binding sites on F1. Surfaces of endothelial cells exhibited affinity for PEDF‐binding proteins of ∼ 60 kDa. Antibodies to F1β‐subunit specifically captured PEDF‐binding components in endothelial plasma membranes. The extracellular ATP synthesis activity of endothelial cells was examined in the presence of PEDF. PEDF significantly reduced the amount of extracellular ATP produced by endothelial cells, in agreement with direct interactions between cell‐surface ATP synthase and PEDF. In addition to demonstrating that PEDF binds to cell‐surface F1, these results show that PEDF is a ligand for endothelial cell‐surface F1Fo‐ATP synthase. They suggest that PEDF‐mediated inhibition of ATP synthase may form part of the biochemical mechanisms by which PEDF exerts its antiangiogenic activity.Structured digital abstract MINT‐7711286: angiostatin (uniprotkb:P00747) physically interacts (MI:0915) with F‐ATPase alpha subunit (uniprotkb:P07251), F‐ATPase beta subunit (uniprotkb:P00830), F‐ATPase gamma subunit (uniprotkb:P38077), F‐ATPase delta subunit (uniprotkb:Q12165) and F‐ATPase epsilon subunit (uniprotkb:P21306) by competition binding (MI:0405) MINT‐7711113: angiostatin (uniprotkb:P00747) physically interacts (MI:0915) with F‐ATPase epsilon subunit (uniprotkb:P21306), F‐ATPase delta subunit (uniprotkb:Q12165), F‐ATPase gamma subunit (uniprotkb:P38077), F‐ATPase beta subunit(uniprotkb:P00830) and F‐ATPase alpha subunit (uniprotkb:P07251) by surface plasmon resonance (MI:0107) MINT‐7711060: F‐ATPase gamma subunit (uniprotkb:P38077), F‐ATPase beta subunit (uniprotkb:P00830), F‐ATPase alpha subunit (uniprotkb:P07251) and PEDF (uniprotkb:P36955) physically interact (MI:0915) by molecular sieving (MI:0071) MINT‐7711313: F‐ATPase epsilon subunit (uniprotkb:P21306), F‐ATPase delta subunit (uniprotkb:Q12165), PEDF (uniprotkb:P36955), F‐ATPase alpha subunit (uniprotkb:P07251), F‐ATPase beta subunit (uniprotkb:P00830) and F‐ATPase gamma subunit(uniprotkb:P38077) physically interact (MI:0915) by molecular sieving (MI:0071) MINT‐7711083: PEDF (uniprotkb:P36955) physically interacts (MI:0915) with F‐ATPase epsilon subunit (uniprotkb:P21306), F‐ATPase delta subunit (uniprotkb:Q12165), F‐ATPase gamma subunit (uniprotkb:P38077), F‐ATPase beta subunit (uniprotkb:P00830) and F‐ATPase alpha subunit (uniprotkb:P07251) by surface plasmon resonance (MI:0107)