Nanjundappa Sandeep

Mr. Nanjundappa Sandeep

University of Agricultural and Horticultural Sciences, Shimoga, Karnātaka, International
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Research Focus & Metrics

Academic Career Length

5Years (2022-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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29 June 2022 in Horticulturae
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NSNanjundappa Sandeep
Nanjundappa Sandeep
DMDUSHYANTH Marulasiddappa
DUSHYANTH Marulasiddappa
shankarappa Sridharashankarappa Sridhara
shankarappa Sridhara
LDLakshmana Dasaiah
Lakshmana Dasaiah
SMSatish Kundur Mahadevappa
Satish Kundur Mahadevappa
HEHosam O. Elansary
Hosam O. Elansary
Wild relatives of okra represent a good source of variation for breeding programs, particularly for traits related to biotic and abiotic stresses and fruit quality. However, wild species remain largely unexploited for okra breeding. The cultivated okra accession Abelmoschus esculentus cv. ‘Arka Anamika’ was crossed with three wild accessions: Abelmoschus manihot, Abelmoschus ficulens and Abelmoschus moschatus. The crossability was estimated based on fruit set, seed set and germination rate. The results of cross compatibility studies revealed that the crosses are compatible only when cultivated A. esculentus is used as a female, and reciprocal crosses were not successful in any of the three wild species. Higher fruit set (87.2%) and seed germination (92%) were obtained from the crosses ‘Arka Anamika’ × Abelmoschus manihot. The interspecific F1s exhibited normal growth, flowering and fruit formation, but the hybrids were completely sterile on selfing due to abnormal meiosis. Characterization of the parents and interspecific hybrids revealed that the interspecific hybrids were generally more vigorous than the parents and displayed greater alliance towards their wild parent. The sterile F1s were further treated with 0.1% colchicine to restore fertility. The three interspecific crosses showed considerable differences in mean performance and heterosis over mid parent and better parent. The cross ‘A. Anamika’ × A. manihot displayed positive heterosis over mid parent and better parent for the yield traits, viz., fruit yield per plant, number of fruits per plant, number of primary branches per plant and plant height. The information obtained in the study on crossability relationship, phenotypic characterization and heterosis in interspecific hybrids will assist breeders in the development of prebreeding material.

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Swati SinghSwati Singh
Swati Singh
GPGanesan Prakash
Ganesan Prakash
NSNanjundappa Sandeep
Nanjundappa Sandeep
RMRenuka Malipatil
Renuka Malipatil
PKPrerana Kalita
Prerana Kalita
NTNepolean Thirunavukkarasu
Nepolean Thirunavukkarasu
Foliar blast, caused by Pyricularia grisea, poses a major challenge to pearl millet (Pennisetum glaucum (L.) R. Br) production, leading to severe yield losses, particularly in rainfed ecologies. This study aimed to elucidate the genetic basis of blast resistance through a genome-wide association study (GWAS) involving 281 diverse pearl millet inbreds. GWAS panel was phenotyped for blast resistance against three distinct isolates of P. grisea collected from Delhi, Gujarat, and Rajasthan locations, revealing a significant variability with 16.7% of the inbreds showing high resistance. Bayesian information and linkage disequilibrium iteratively nested keyway (BLINK) and Multi-Locus Mixed Model (MLMM) models using transformed means identified 68 significant SNPs linked to resistance, with hotspots for resistance-related genes on chromosomes 1, 2, and 6. These regions harbor genes involved in defense mechanisms, including immune response, stress tolerance, signal transduction, transcription regulation, and pathogen defense. Genes, namely 14-3-3-like proteins RGA2, RGA4, hypersensitive-induced response proteins, NHL3, NBS-LRR, LRR-RLK, LRRNT_2, and various transcription factors such as AP2/ERF and WRKY, played a crucial role in the stress-responsive pathways. Analyses of transporter proteins, redox processes, and structural proteins revealed additional mechanisms contributing to blast resistance. This study offers valuable insights into the complex genetic architecture of blast resistance in pearl millet, offering a solid foundation for marker-assisted breeding programs and gene-editing experiments.

25 March 2025 in Plant Molecular Biology Reporter
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NSNanjundappa Sandeep
Nanjundappa Sandeep
BKB. M. Dushyantha Kumar
B. M. Dushyantha Kumar
ACAnilkumar Lalasing Chavan
Anilkumar Lalasing Chavan

29 August 2024 in Indian Journal Of Genetics and Plant Breeding
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NSNanjundappa Sandeep
Nanjundappa Sandeep
BKB.M. Dushyantha Kumar
B.M. Dushyantha Kumar
Okra (Abelmoschus esculentus [L.] Moench) is an annual vegetable crop grown in tropical and subtropical regions of the world. Okra genotypes perform differently under different environmental conditions. Plant breeders have long struggled with the phenomena of genotype x environment interaction, which is a prevalent issue in plant breeding programmes. The main aim of genotype selection is to find okra genotypes with productive traits that might perform better under varied environmental conditions. The Multi-Trait Stability Index (MTSI) and Multi-Trait Genotype-Ideotype Distance Index (MGIDI) were employed for identifying high-performing stable genotypes exhibiting multiple traits. In the current investigation, 42 okra accessions grown in different seasons were assessed for 12 morphological traits. The results obtained by MTSI and MGIDI indexes revealed that, out of 42, only 4 genotypes performed better across the seasons and the four genotypes (UAHS-8, UAHS-10, UAHS-11 and UAHS-19) were selected in the indexes. View on strengths and weakness as described by the MGIDI and MTSI reveals the strength of the ideal genotypes in the present work is mainly focused on average fruit weight and fruit yield per plant. Due to their distinctiveness and ease of use in interpreting data with minimal multicollinearity difficulties, MTSI and MGIDI serve as novel tool for simultaneous genotype selection processes in plant breeding programmes across multi environments.

29 November 2025 in Nature Communications
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KGKrishna Kishore Gali
Krishna Kishore Gali
KKKevin C. Koh
Kevin C. Koh
TSTara Satyavati
Tara Satyavati
GNGanapathy Kuyyamudi Nanaiah
Ganapathy Kuyyamudi Nanaiah
KPK B Palanna
K B Palanna
SKSateesh Kagale
Sateesh Kagale
Little millet is a hardy and nutrient-rich cereal which improves food and nutritional security in marginal environments. Despite its importance, genomic resources for this orphan crop have been limited. Here, we report a high quality, chromosome-scale genome assembly of little millet comprising 18 chromosomes and 59,045 genes. Eleven chromosomes are assembled from telomere to telomere, revealing an 850 Mb tetraploid genome that closely resembles broomcorn millet. Comparative analyses indicate early stages of diploidization, characterized by gene loss and subgenome-specific expression biases that vary across genes and tissues. Resequencing of 300 accessions uncovers extensive genetic diversity, including single-nucleotide polymorphism and structural variants. Genome-wide association studies identify genetic loci linked to grain micronutrient traits, including several associated with high iron content. These genomic and phenotypic resources provide a foundation for molecular breeding and marker-assisted selection, enabling the improvement of little millet as a climate-resilient crop to support global food and nutritional security.