Tobias Butelmann

Mr. Tobias Butelmann

orcid

Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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7 June 2020 in ACS Applied Bio Materials
Verified
Journal Article
Closed access
HPHans Priks
Hans Priks
TBTobias Butelmann
Tobias Butelmann
AIAleksandr Illarionov
Aleksandr Illarionov
TJTrevor G. Johnston
Trevor G. Johnston
CFChristopher Fellin
Christopher Fellin
PLPetri-Jaan Lahtvee
Petri-Jaan Lahtvee

22 June 2020 in Macromolecular Bioscience
Verified
Journal Article
Closed access
PDF file
TJTrevor G. Johnston
Trevor G. Johnston
JFJacob P. Fillman
Jacob P. Fillman
HPHans Priks
Hans Priks
TBTobias Butelmann
Tobias Butelmann
TTTarmo Tamm
Tarmo Tamm
ANAlshakim Nelson
Alshakim Nelson

18 March 2019 in Journal of Hematology & Oncology
Verified
Journal Article
Open access
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MWMarion Wobser
Marion Wobser
AWAlexandra Weber
Alexandra Weber
AGAmelie Glunz
Amelie Glunz
STSaskia Tauch
Saskia Tauch
KSKristina Seitz
Kristina Seitz
RHRoland Houben
Roland Houben
Targeting epigenetic modifiers is effective in cutaneous T cell lymphoma (CTCL). However, there is a need for further improvement of this therapeutic approach. Here, we compared the mode of action of romidepsin (FK228), an established class I histone deacetylase inhibitor, and domatinostat (4SC-202), a novel inhibitor of class I HDACs, which has been reported to also target the lysine-specific histone demethylase 1A (LSD1). We performed MTS assays and flow cytometric analyses of propidium iodide or annexin V-stained cells to assess drug impact on cellular proliferation, cell cycle distribution, and survival. Histone acetylation and methylation as well as caspase activation was analyzed by immunoblot. Gene expression analysis was performed using NanosString technology. Knockdown and knockout of LSD1 was achieved with shRNA and CRISPR/Cas9, respectively, while the CRISPR/Cas9 synergistic activation mediator system was used to induce expression of endogenous HDACs and LSD1. Furthermore, time-lapse fluorescence microscopy and an in vitro tubulin polymerization assay were applied. While FK228 as well as 4SC-202 potently induced cell death in six different CTCL cell lines, only in the case of 4SC-202 death was preceded by an accumulation of cells in the G2/M phase of the cell cycle. Surprisingly, apoptosis and accumulation of cells with double DNA content occurred already at 4SC-202 concentrations hardly affecting histone acetylation and methylation, and provoking significantly less changes in gene expression compared to biologically equivalent doses of FK228. Indeed, we provide evidence that the 4SC-202-induced G2/M arrest in CTCL cells is independent of de novo transcription. Furthermore, neither enforced expression of HDAC1 nor knockdown or knockout of LSD1 affected the 4SC-202-induced effects. Since time-lapse microscopy revealed that 4SC-202 could affect mitotic spindle formation, we performed an in vitro tubulin polymerization assay revealing that 4SC-202 can directly inhibit microtubule formation. We demonstrate that 4SC-202, a drug currently tested in clinical trials, effectively inhibits growth of CTCL cells. The anti-cancer cell activity of 4SC-202 is however not limited to LSD1-inhibition, modulation of histone modifications, and consecutive alteration of gene expression. Indeed, the compound is also a potent microtubule-destabilizing agent.

Verified
Journal Article
Open access
PDF file
TBTobias Butelmann
Tobias Butelmann
Yawei GuYawei Gu
Yawei Gu
ALAijun Li
Aijun Li
FTFabian Tribukait-Riemenschneider
Fabian Tribukait-Riemenschneider
JHJulius Hoffmann
Julius Hoffmann
VSV. Prasad Shastri
V. Prasad Shastri
In multicellular organisms, cells are organized in a 3-dimensional framework and this is essential for organogenesis and tissue morphogenesis. Systems to recapitulate 3D cell growth are therefore vital for understanding development and cancer biology. Cells organized in 3D environments can evolve certain phenotypic traits valuable to physiologically relevant models that cannot be accessed in 2D culture. Cellular spheroids constitute an important aspect of in vitro tumor biology and they are usually prepared using the hanging drop method. Here a 3D printed approach is demonstrated to fabricate bespoke hanging drop devices for the culture of tumor cells. The design attributes of the hanging drop device take into account the need for high-throughput, high efficacy in spheroid formation, and automation. Specifically, in this study, custom-fit, modularized hanging drop devices comprising of inserts (Q-serts) were designed and fabricated using fused filament deposition (FFD). The utility of the Q-serts in the engineering of unicellular and multicellular spheroids-synthetic tumor microenvironment mimics (STEMs)—was established using human (cancer) cells. The culture of spheroids was automated using a pipetting robot and bioprinted using a custom bioink based on carboxylated agarose to simulate a tumor microenvironment (TME). The spheroids were characterized using light microscopy and histology. They showed good morphological and structural integrity and had high viability throughout the entire workflow. The systems and workflow presented here represent a user-focused 3D printing-driven spheroid culture platform which can be reliably reproduced in any research environment and scaled to- and on-demand. The standardization of spheroid preparation, handling, and culture should eliminate user-dependent variables, and have a positive impact on translational research to enable direct comparison of scientific findings.

31 October 2024 in Micromachines
Verified
Journal Article
Open access
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JEJared Allen Engelken
Jared Allen Engelken
TBTobias Butelmann
Tobias Butelmann
FTFabian Tribukait-Riemenschneider
Fabian Tribukait-Riemenschneider
VSV. Prasad Shastri
V. Prasad Shastri
Microfluidic devices (µFDs) have been explored extensively in drug screening and studying cellular processes such as migration and metastasis. However, the fabrication and implementation of microfluidic devices pose cost and logistical challenges that limit wider-spread adoption. Despite these challenges, light-based 3D printing offers a potential alternative to device fabrication. This study reports on the development of millifluidic devices (MiFDs) for disease modeling and elucidates the methods and implications of the design, production, and testing of 3D-printed MiFDs. It further details how such millifluidic devices can be cost-efficiently and effortlessly produced. The MiFD was developed through an iterative process with analytical tests (flow tests, leak tests, cytotoxicity assays, and microscopic analyses), driving design evolution and determination of the suitability of the devices for disease modeling and cancer research. The design evolution also considered flow within tissues and replicates interstitial flow between the main flow path and the modules designed to house and support organ-mimicking cancer cell spheroids. Although the primary stereolithographic (SLA) resin used in this study showed cytotoxic potential despite its biocompatibility certifications, the MiFDs possessed essential attributes for cell culturing. In summary, SLA 3D printing enables the production of MiFDs as a cost-effective, rapid prototyping alternative to standard µFD fabrication for investigating disease-related processes.

18 June 2025 in Materials & Design
Verified
Journal Article
Open access
Yawei GuYawei Gu
Yawei Gu
GZGangyu Zhang
Gangyu Zhang
SPSébastien Pigeot
Sébastien Pigeot
YQYi Qian
Yi Qian
TBTobias Butelmann
Tobias Butelmann
VSV. Prasad Shastri
V. Prasad Shastri