Gait analysis continues to be an important technique for many clinical applications to diagnose and monitor certain diseases. Many mental and physical abnormalities cause measurable differences in a person's gait. Gait analysis has applications in sport, computer games, physical rehabilitation, clinical assessment, surveillance, human recognition, modeling, and many other fields. There are established methods using various sensors for gait analysis, of which accelerometers are one of the most often employed. Accelerometer sensors are generally more user friendly and less invasive. In this paper, we review research regarding accelerometer sensors used for gait analysis with particular focus on clinical applications. We provide a brief introduction to accelerometer theory followed by other popular sensing technologies. Commonly used gait phases and parameters are enumerated. The details of selecting the papers for review are provided. We also review several gait analysis software. Then we provide an extensive report of accelerometry-based gait analysis systems and applications, with additional emphasis on trunk accelerometry. We conclude this review with future research directions.
Wearable heart rate sensors such as those found in smartwatches are commonly based upon Photoplethysmography (PPG) which shines a light into the wrist and measures the amount of light reflected back. This method works well for stationary subjects, but in exercise situations, PPG signals are heavily corrupted by motion artifacts. The presence of these artifacts necessitates the creation of signal processing algorithms for removing the motion interference and allowing the true heart related information to be extracted from the PPG trace during exercise. Here, we describe a new publicly available database of PPG signals collected during exercise for the creation and validation of signal processing algorithms extracting heart rate and heart rate variability from PPG signals. PPG signals from the wrist are recorded together with chest electrocardiography (ECG) to allow a reference/comparison heart rate to be found, and the temporal alignment between the two signal sets is estimated from the signal timestamps. The new database differs from previously available public databases because it includes wrist PPG recorded during walking, running, easy bike riding and hard bike riding. It also provides estimates of the wrist movement recorded using a 3-axis low-noise accelerometer, a 3-axis wide-range accelerometer, and a 3-axis gyroscope. The inclusion of gyroscopic information allows, for the first time, separation of acceleration due to gravity and acceleration due to true motion of the sensor. The hypothesis is that the improved motion information provided could assist in the development of algorithms with better PPG motion artifact removal performance.
23 February 2021 in IEEE Transactions on Services Computing
In an attempt to reduce the infection rate of the COrona VIrus Disease-19 (Covid-19) countries around the world have echoed the exigency for an economical, accessible, point-of-need diagnostic test to identify Covid-19 carriers so that they (individuals who test positive) can be advised to self isolate rather than the entire community. Availability of a quick turn-around time diagnostic test would essentially mean that life, in general, can return to normality-at-large. In this regards, studies concurrent in time with ours have investigated different respiratory sounds, including cough, to recognise potential Covid-19 carriers. However, these studies lack clinical control and rely on Internet users confirming their test results in a web questionnaire (crowdsourcing) thus rendering their analysis inadequate. We seek to evaluate the detection performance of a primary screening tool of Covid-19 solely based on the cough sound from 8,380clinically validated samples with laboratory molecular-test ( 2,339 Covid-19 positive and 6,041 Covid-19 negative) under quantitative RT-PCR (qRT-PCR) from certified laboratories. All collected samples were clinically labelled, i.e., Covid-19 positive or negative, according to the results in addition to the disease severity based on the qRT-PCR threshold cycle (Ct) and lymphocytes count from the patients. Our proposed generic method is an algorithm based on Empirical Mode Decomposition (EMD) for cough sound detection with subsequent classification based on a tensor of audio sonographs and deep artificial neural network classifier with convolutional layers called ‘DeepCough’ . Two different versions of DeepCough based on the number of tensor dimensions, i.e., DeepCough2D and DeepCough3D, have been investigated. These methods have been deployed in a multi-platform prototype web-app ‘CoughDetect’ . Covid-19 recognition results rates achieved a promising AUC (Area Under Curve) of $98.80\% \pm 0.83\%$ , sensitivity of $96.43\% \pm 1.85\%$ , and specificity of $96.20\% \pm 1.74\%$ and average AUC of $81.08\% \pm 5.05\%$ for the recognition of three severity levels. Our proposed web tool as a point-of-need primary diagnostic test for Covid-19 facilitates the rapid detection of the infection. We believe it has the potential to significantly hamper the Covid-19 pandemic across the world.
Accurate prediction of abdominal aortic aneurysm (AAA) growth in an individual can allow personalised stratification of surveillance intervals and better inform the timing for surgery. The authors recently described the novel significant association between flow mediated dilatation (FMD) and future AAA growth. The feasibility of predicting future AAA growth was explored in individual patients using a set of benchmark machine learning techniques. The Oxford Abdominal Aortic Aneurysm Study (OxAAA) prospectively recruited AAA patients undergoing the routine NHS management pathway. In addition to the AAA diameter, FMD was systemically measured in these patients. A benchmark machine learning technique (non-linear Kernel support vector regression) was applied to predict future AAA growth in individual patients, using their baseline FMD and AAA diameter as input variables. Prospective growth data were recorded at 12 months (360 ± 49 days) in 94 patients. Of these, growth data were further recorded at 24 months (718 ± 81 days) in 79 patients. The average growth in AAA diameter was 3.4% at 12 months, and 2.8% per year at 24 months. The algorithm predicted the individual's AAA diameter to within 2 mm error in 85% and 71% of patients at 12 and 24 months. The data highlight the utility of FMD as a biomarker for AAA and the value of machine learning techniques for AAA research in the new era of precision medicine.
13 January 2014 in IEEE Transactions on Biomedical Engineering
This paper presents a new approach to gait analysis and parameter estimation from a single miniaturized ear-worn sensor embedded with a triaxial accelerometer. Singular spectrum analysis combined with the longest common subsequence algorithm has been used as a basis for gait parameter estimation. It incorporates information from all axes of the accelerometer to estimate parameters including swing, stance, and stride times. Rather than only using local features of the raw signals, the periodicity of the signals is also taken into account. The hypotheses tested by this study include: 1) how accurate is the ear-worn sensor in terms of gait parameter extraction compared to the use of an instrumented treadmill; 2) does the ear-worn sensor provide a feasible option for assessment and quantification of gait pattern changes. Key gait events for normal subjects such as heel contact and toe off are validated with a high-speed camera, as well as a force-plate instrumented treadmill. Ten healthy adults walked for 20 min on a treadmill with an increasing incline of 2% every 2 min. The upper and lower limits of the absolute errors using 95% confidence intervals for swing, stance, and stride times were obtained as 35.5 ±3.99 ms, 36.9 ±3.84 ms, and 17.9 ±2.29 ms, respectively.
13 February 2017 in IEEE Transactions on Biomedical Engineering
Objective: Recently numerous methods have been proposed for estimating average heart rate using photoplethysmography (PPG) during physical activity, overcoming the significant interference that motion causes in PPG traces. We propose a new algorithm framework for extracting instantaneous heart rate from wearable PPG and Electrocardiogram (ECG) signals to provide an estimate of heart rate variability during exercise. Methods: For ECG signals, we propose a new spectral masking approach which modifies a particle filter tracking algorithm, and for PPG signals constrains the instantaneous frequency obtained from the Hilbert transform to a region of interest around a candidate heart rate measure. Performance is verified using accelerometry and wearable ECG and PPG data from subjects while biking and running on a treadmill. Results: Instantaneous heart rate provides more information than average heart rate alone. The instantaneous heart rate can be extracted during motion to an accuracy of 1.75 beats per min (bpm) from PPG signals and 0.27 bpm from ECG signals. Conclusion: Estimates of instantaneous heart rate can now be generated from PPG signals during motion. These estimates can provide more information on the human body during exercise. Significance: Instantaneous heart rate provides a direct measure of vagal nerve and sympathetic nervous system activity and is of substantial use in a number of analyzes and applications. Previously it has not been possible to estimate instantaneous heart rate from wrist wearable PPG signals.