Xin Yu

Dr. Xin Yu


Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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12 August 2020 in Neuron
Verified
Journal Article
Closed access
PDPatrick J. Drew
Patrick J. Drew
CMCeline Mateo
Celine Mateo
KTKevin L. Turner
Kevin L. Turner
XYXin Yu
Xin Yu
DKDavid Kleinfeld
David Kleinfeld

1 February 2018 in Neuron
Verified
Journal Article
Closed access
YHYi He
Yi He
MWMaosen Wang
Maosen Wang
XCXuming Chen
Xuming Chen
RPRolf Pohmann
Rolf Pohmann
JPJonathan R. Polimeni
Jonathan R. Polimeni
XYXin Yu
Xin Yu

8 February 2016 in Nature Methods
Verified
Journal Article
Closed access
PDF file
XYXin Yu
Xin Yu
YHYi He
Yi He
MWMaosen Wang
Maosen Wang
HMHellmut Merkle
Hellmut Merkle
SDStephen J Dodd
Stephen J Dodd
AKAlan P Koretsky
Alan P Koretsky

30 January 2018 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Open access
PDF file
MWMaosen Wang
Maosen Wang
YHYi He
Yi He
TSTerrence J. Sejnowski
Terrence J. Sejnowski
XYXin Yu
Xin Yu
Significance: The role of astrocytes on brain function is controversial in many aspects. It remains challenging to specify the in vivo functional impact of astrocytic calcium signal when mediating vasodilation/constriction at varied physiological or pathophysiological conditions. Here, we applied simultaneous fMRI and GCaMP-mediated Ca 2+ optical fiber recording to detect distinct astrocytic Ca 2+ signals (evoked vs. intrinsic) coupled to positive and negative blood-oxygen-level-dependent signals, respectively and concurrently, with unique spatial and temporal patterns. Not only did we demonstrate the distinct neurovascular coupling events coupled to the evoked and intrinsic astrocytic calcium signals, but also revealed the thalamic regulation mechanism underlying the astrocytic calcium-mediated brain state switch. This astrocytic-relevant regulatory mechanism could underlie numerous brain disorder and injury models relevant to gliovascular disruption.

5 March 2020 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Closed access
PDF file
PPPatricia Pais-Roldán
Patricia Pais-Roldán
KTKengo Takahashi
Kengo Takahashi
FSFilip Sobczak
Filip Sobczak
YCYi Chen
Yi Chen
XZXiaoning Zhao
Xiaoning Zhao
XYXin Yu
Xin Yu
Pupillometry, a noninvasive measure of arousal, complements human functional MRI (fMRI) to detect periods of variable cognitive processing and identify networks that relate to particular attentional states. Even under anesthesia, pupil dynamics correlate with brain-state fluctuations, and extended dilations mark the transition to more arousable states. However, cross-scale neuronal activation patterns are seldom linked to brain state-dependent pupil dynamics. Here, we complemented resting-state fMRI in rats with cortical calcium recording (GCaMP-mediated) and pupillometry to tackle the linkage between brain-state changes and neural dynamics across different scales. This multimodal platform allowed us to identify a global brain network that covaried with pupil size, which served to generate an index indicative of the brain-state fluctuation during anesthesia. Besides, a specific correlation pattern was detected in the brainstem, at a location consistent with noradrenergic cell group 5 (A5), which appeared to be dependent on the coupling between different frequencies of cortical activity, possibly further indicating particular brain-state dynamics. The multimodal fMRI combining concurrent calcium recordings and pupillometry enables tracking brain state-dependent pupil dynamics and identifying unique cross-scale neuronal dynamic patterns under anesthesia.

20 November 2019 in Nature Communications
Verified
Journal Article
Open access
XCXuming Chen
Xuming Chen
FSFilip Sobczak
Filip Sobczak
YCYi Chen
Yi Chen
YJYuanyuan Jiang
Yuanyuan Jiang
CQChunqi Qian
Chunqi Qian
XYXin Yu
Xin Yu
Extensive in vivo imaging studies investigate the hippocampal neural network function, mainly focusing on the dorsal CA1 region given its optical accessibility. Multi-modality fMRI with simultaneous hippocampal electrophysiological recording reveal broad cortical correlation patterns, but the detailed spatial hippocampal functional map remains lacking given the limited fMRI resolution. In particular, hemodynamic responses linked to specific neural activity are unclear at the single-vessel level across hippocampal vasculature, which hinders the deciphering of the hippocampal malfunction in animal models and the translation to critical neurovascular coupling (NVC) patterns for human fMRI. We simultaneously acquired optogenetically-driven neuronal Ca2+ signals with single-vessel blood-oxygen-level-dependent (BOLD) and cerebral-blood-volume (CBV)-fMRI from individual venules and arterioles. Distinct spatiotemporal patterns of hippocampal hemodynamic responses were correlated to optogenetically evoked and spreading depression-like calcium events. The calcium event-related single-vessel hemodynamic modeling revealed significantly reduced NVC efficiency upon spreading depression-like (SDL) events, providing a direct measure of the NVC function at various hippocampal states.