Nils Strodthoff

Prof. Dr. Nils Strodthoff

School of Medicine and Health Sciences, Oldenburg University, 26129 Oldenburg, Germany
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Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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25 May 2020 in Scientific Data
Verified
Journal Article
Open access
PDF file
PWPatrick Wagner
Patrick Wagner
NSNils Strodthoff
Nils Strodthoff
RBRalf-Dieter Bousseljot
Ralf-Dieter Bousseljot
DKDieter Kreiseler
Dieter Kreiseler
FLFatima I. Lunze
Fatima I. Lunze
TSTobias Schaeffter
Tobias Schaeffter
Electrocardiography (ECG) is a key non-invasive diagnostic tool for cardiovascular diseases which is increasingly supported by algorithms based on machine learning. Major obstacles for the development of automatic ECG interpretation algorithms are both the lack of public datasets and well-defined benchmarking procedures to allow comparison s of different algorithms. To address these issues, we put forward PTB-XL, the to-date largest freely accessible clinical 12-lead ECG-waveform dataset comprising 21837 records from 18885 patients of 10 seconds length. The ECG-waveform data was annotated by up to two cardiologists as a multi-label dataset, where diagnostic labels were further aggregated into super and subclasses. The dataset covers a broad range of diagnostic classes including, in particular, a large fraction of healthy records. The combination with additional metadata on demographics, additional diagnostic statements, diagnosis likelihoods, manually annotated signal properties as well as suggested folds for splitting training and test sets turns the dataset into a rich resource for the development and the evaluation of automatic ECG interpretation algorithms.

9 September 2020 in IEEE Journal of Biomedical and Health Informatics
Verified
Journal Article
Open access
NSNils Strodthoff
Nils Strodthoff
PWPatrick Wagner
Patrick Wagner
TSTobias Schaeffter
Tobias Schaeffter
WSWojciech Samek
Wojciech Samek
Electrocardiography (ECG) is a very common, non-invasive diagnostic procedure and its interpretation is increasingly supported by algorithms. The progress in the field of automatic ECG analysis has up to now been hampered by a lack of appropriate datasets for training as well as a lack of well-defined evaluation procedures to ensure comparability of different algorithms. To alleviate these issues, we put forward first benchmarking results for the recently published, freely accessible clinical 12-lead ECG dataset PTB-XL, covering a variety of tasks from different ECG statement prediction tasks to age and sex prediction. Among the investigated deep-learning-based timeseries classification algorithms, we find that convolutional neural networks, in particular resnet- and inception-based architectures, show the strongest performance across all tasks. We find consistent results on the ICBEB2018 challenge ECG dataset and discuss prospects of transfer learning using classifiers pretrained on PTB-XL. These benchmarking results are complemented by deeper insights into the classification algorithm in terms of hidden stratification, model uncertainty and an exploratory interpretability analysis, which provide connecting points for future research on the dataset. Our results emphasize the prospects of deep-learning-based algorithms in the field of ECG analysis, not only in terms of quantitative accuracy but also in terms of clinically equally important further quality metrics such as uncertainty quantification and interpretability. With this resource, we aim to establish the PTB-XL dataset as a resource for structured benchmarking of ECG analysis algorithms and encourage other researchers in the field to join these efforts.

25 March 2015 in Physical Review D
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Journal Article
Closed access
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MMMario Mitter
Mario Mitter
JPJan M. Pawlowski
Jan M. Pawlowski
NSNils Strodthoff
Nils Strodthoff
We present a quantitative analysis of chiral symmetry breaking in two-flavor continuum QCD in the quenched limit. The theory is set up at perturbative momenta, where asymptotic freedom leads to precise results. The evolution of QCD towards the hadronic phase is achieved by means of dynamical hadronization in the nonperturbative functional renormalization group approach. We use a vertex expansion scheme based on gauge-invariant operators and discuss its convergence properties and the remaining systematic errors. In particular, we present results for the quark propagator, the full tensor structure and momentum dependence of the quark-gluon vertex, and the four-Fermi scatterings.

6 September 2016 in Physical Review D
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Journal Article
Open access
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ACAnton K. Cyrol
Anton K. Cyrol
LFLeonard Fister
Leonard Fister
MMMario Mitter
Mario Mitter
JPJan M. Pawlowski
Jan M. Pawlowski
NSNils Strodthoff
Nils Strodthoff
We investigate Landau gauge SU(3) Yang-Mills theory in a systematic vertex expansion scheme for the effective action with the functional renormalization group. Particular focus is put on the dynamical creation of the gluon mass gap at nonperturbative momenta and the consistent treatment of quadratic divergences. The nonperturbative ghost and transverse gluon propagators as well as the momentum-dependent ghost-gluon, three-gluon and four-gluon vertices are calculated self-consistently with the classical action as the only input. The apparent convergence of the expansion scheme is discussed and within the errors, our numerical results are in quantitative agreement with available lattice results.

9 March 2018 in Physical Review D
Verified
Journal Article
Open access
PDF file
ACAnton K. Cyrol
Anton K. Cyrol
MMMario Mitter
Mario Mitter
JPJan M. Pawlowski
Jan M. Pawlowski
NSNils Strodthoff
Nils Strodthoff
We present nonperturbative first-principle results for quark, gluon, and meson 1PI correlation functions of two-flavor Landau-gauge QCD in the vacuum. These correlation functions carry the full information about the theory. They are obtained by solving their functional renormalization group equations in a systematic vertex expansion, aiming at apparent convergence. This work represents a crucial prerequisite for quantitative first-principle studies of the QCD phase diagram and the hadron spectrum within this framework. In particular, we have computed the gluon, ghost, quark, and scalar-pseudoscalar meson propagators, as well as gluon, ghost-gluon, quark-gluon, quark, quark-meson, and meson interactions. Our results stress the crucial importance of the quantitatively correct running of different vertices in the semiperturbative regime for describing the phenomena and scales of confinement and spontaneous chiral symmetry breaking without phenomenological input.

1 February 2022 in Computers in Biology and Medicine
Verified
Journal Article
Open access
TMTemesgen Mehari
Temesgen Mehari
NSNils Strodthoff
Nils Strodthoff
Clinical 12-lead electrocardiography (ECG) is one of the most widely encountered kinds of biosignals. Despite the increased availability of public ECG datasets, label scarcity remains a central challenge in the field. Self-supervised learning represents a promising way to alleviate this issue. This would allow to train more powerful models given the same amount of labeled data and to incorporate or improve predictions about rare diseases, for which training datasets are inherently limited. In this work, we put forward the first comprehensive assessment of self-supervised representation learning from clinical 12-lead ECG data. To this end, we adapt state-of-the-art self-supervised methods based on instance discrimination and latent forecasting to the ECG domain. In a first step, we learn contrastive representations and evaluate their quality based on linear evaluation performance on a recently established, comprehensive, clinical ECG classification task. In a second step, we analyze the impact of self-supervised pretraining on finetuned ECG classifiers as compared to purely supervised performance. For the best-performing method, an adaptation of contrastive predictive coding, we find a linear evaluation performance only 0.5% below supervised performance. For the finetuned models, we find improvements in downstream performance of roughly 1% compared to supervised performance, label efficiency, as well as robustness against physiological noise. This work clearly establishes the feasibility of extracting discriminative representations from ECG data via self-supervised learning and the numerous advantages when finetuning such representations on downstream tasks as compared to purely supervised training. As first comprehensive assessment of its kind in the ECG domain carried out exclusively on publicly available datasets, we hope to establish a first step towards reproducible progress in the rapidly evolving field of representation learning for biosignals.