Jenny Yang

Dr. Jenny Yang

orcid

Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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7 June 2022 in npj Digital Medicine
Verified
Journal Article
Open access
PDF file
JYJenny Yang
Jenny Yang
ASAndrew A. S. Soltan
Andrew A. S. Soltan
DCDavid A. Clifton
David A. Clifton
As patient health information is highly regulated due to privacy concerns, most machine learning (ML)-based healthcare studies are unable to test on external patient cohorts, resulting in a gap between locally reported model performance and cross-site generalizability. Different approaches have been introduced for developing models across multiple clinical sites, however less attention has been given to adopting ready-made models in new settings. We introduce three methods to do this—(1) applying a ready-made model “as-is” (2); readjusting the decision threshold on the model’s output using site-specific data and (3); finetuning the model using site-specific data via transfer learning. Using a case study of COVID-19 diagnosis across four NHS Hospital Trusts, we show that all methods achieve clinically-effective performances (NPV > 0.959), with transfer learning achieving the best results (mean AUROCs between 0.870 and 0.925). Our models demonstrate that site-specific customization improves predictive performance when compared to other ready-made approaches.

29 March 2023 in npj Digital Medicine
Verified
Journal Article
Open access
PDF file
JYJenny Yang
Jenny Yang
ASAndrew A. S. Soltan
Andrew A. S. Soltan
DEDavid W. Eyre
David W. Eyre
YYYang Yang
Yang Yang
DCDavid A. Clifton
David A. Clifton
Machine learning is becoming increasingly prominent in healthcare. Although its benefits are clear, growing attention is being given to how these tools may exacerbate existing biases and disparities. In this study, we introduce an adversarial training framework that is capable of mitigating biases that may have been acquired through data collection. We demonstrate this proposed framework on the real-world task of rapidly predicting COVID-19, and focus on mitigating site-specific (hospital) and demographic (ethnicity) biases. Using the statistical definition of equalized odds, we show that adversarial training improves outcome fairness, while still achieving clinically-effective screening performances (negative predictive values >0.98). We compare our method to previous benchmarks, and perform prospective and external validation across four independent hospital cohorts. Our method can be generalized to any outcomes, models, and definitions of fairness.

31 July 2023 in Nature Machine Intelligence
Verified
Journal Article
Open access
PDF file
JYJenny Yang
Jenny Yang
ASAndrew A. S. Soltan
Andrew A. S. Soltan
DEDavid W. Eyre
David W. Eyre
DCDavid A. Clifton
David A. Clifton
As models based on machine learning continue to be developed for healthcare applications, greater effort is needed to ensure that these technologies do not reflect or exacerbate any unwanted or discriminatory biases that may be present in the data. Here we introduce a reinforcement learning framework capable of mitigating biases that may have been acquired during data collection. In particular, we evaluated our model for the task of rapidly predicting COVID-19 for patients presenting to hospital emergency departments and aimed to mitigate any site (hospital)-specific and ethnicity-based biases present in the data. Using a specialized reward function and training procedure, we show that our method achieves clinically effective screening performances, while significantly improving outcome fairness compared with current benchmarks and state-of-the-art machine learning methods. We performed external validation across three independent hospitals, and additionally tested our method on a patient intensive care unit discharge status task, demonstrating model generalizability.

27 September 2024 in Nature Communications
Verified
Journal Article
Open access
PDF file
JYJenny Yang
Jenny Yang
NDNguyen Thanh Dung
Nguyen Thanh Dung
PTPham Ngoc Thach
Pham Ngoc Thach
NPNguyen Thanh Phong
Nguyen Thanh Phong
VPVu Dinh Phu
Vu Dinh Phu
DCDavid Clifton
David Clifton
The integration of artificial intelligence (AI) into healthcare systems within low-middle income countries (LMICs) has emerged as a central focus for various initiatives aiming to improve healthcare access and delivery quality. In contrast to high-income countries (HICs), which often possess the resources and infrastructure to adopt innovative healthcare technologies, LMICs confront resource limitations such as insufficient funding, outdated infrastructure, limited digital data, and a shortage of technical expertise. Consequently, many algorithms initially trained on data from non-LMIC settings are now being employed in LMIC contexts. However, the effectiveness of these systems in LMICs can be compromised when the unique local contexts and requirements are not adequately considered. In this study, we evaluate the feasibility of utilizing models developed in the United Kingdom (a HIC) within hospitals in Vietnam (a LMIC). Consequently, we present and discuss practical methodologies aimed at improving model performance, emphasizing the critical importance of tailoring solutions to the distinct healthcare systems found in LMICs. Our findings emphasize the necessity for collaborative initiatives and solutions that are sensitive to the local context in order to effectively tackle the healthcare challenges that are unique to these regions.

7 February 2023 in IEEE Reviews in Biomedical Engineering
Verified
Journal Article
Open access
HLHuiqi Yvonne Lu
Huiqi Yvonne Lu
Xiao-Rong DingXiao-Rong Ding
Xiao-Rong Ding
JHJane E. Hirst
Jane E. Hirst
YYYang Yang
Yang Yang
JYJenny Yang
Jenny Yang
DCDavid Clifton
David Clifton
Innovations in digital health and machine learning are changing the path of clinical health and care. People from different geographical locations and cultural backgrounds can benefit from the mobility of wearable devices and smartphones to monitor their health ubiquitously. This paper focuses on reviewing the digital health and machine learning technologies used in gestational diabetes – a subtype of diabetes that occurs during pregnancy. This paper reviews sensor technologies used in blood glucose monitoring devices, digital health innovations and machine learning models for gestational diabetes monitoring and management, in clinical and commercial settings, and discusses future directions. Despite one in six mothers having gestational diabetes, digital health applications were underdeveloped, especially the techniques that can be deployed in clinical practice. There is an urgent need to (1) develop clinically interpretable machine learning methods for patients with gestational diabetes, assisting health professionals with treatment, monitoring, and risk stratification before, during and after their pregnancies; (2) adapt and develop clinically-proven devices for patient self-management of health and well-being at home settings (“virtual ward” and virtual consultation), thereby improving clinical outcomes by facilitating timely intervention; and (3) ensure innovations are affordable and sustainable for all women with different socioeconomic backgrounds and clinical resources.

28 November 2023 in Machine Learning
Verified
Journal Article
Open access
PDF file
JYJenny Yang
Jenny Yang
RERasheed El-Bouri
Rasheed El-Bouri
OOOdhran O’dOnoghue
Odhran O’dOnoghue
ALAlexander S. Lachapelle
Alexander S. Lachapelle
ASAndrew A. S. Soltan
Andrew A. S. Soltan
DCDavid Clifton
David Clifton
With the rapid growth of memory and computing power, datasets are becoming increasingly complex and imbalanced. This is especially severe in the context of clinical data, where there may be one rare event for many cases in the majority class. We introduce an imbalanced classification framework, based on reinforcement learning, for training extremely imbalanced data sets, and extend it for use in multi-class settings. We combine dueling and double deep Q-learning architectures, and formulate a custom reward function and episode-training procedure, specifically with the capability of handling multi-class imbalanced training. Using real-world clinical case studies, we demonstrate that our proposed framework outperforms current state-of-the-art imbalanced learning methods, achieving more fair and balanced classification, while also significantly improving the prediction of minority classes.