Russell Thomson

Dr. Russell Thomson

orcid

Research Focus & Metrics

Academic Career Length

29Years (1998-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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5 February 2014 in Nature
Verified
Journal Article
Open access
GEGraham J. Edgar
Graham J. Edgar
RSRick D. Stuart-Smith
Rick D. Stuart-Smith
TWTrevor J. Willis
Trevor J. Willis
Stuart KininmonthStuart Kininmonth
Stuart Kininmonth
SBSusan Baker
Susan Baker
Russell ThomsonRussell Thomson
Russell Thomson
In line with global targets agreed under the Convention on Biological Diversity, the number of marine protected areas (MPAs) is increasing rapidly, yet socio-economic benefits generated by MPAs remain difficult to predict and under debate. MPAs often fail to reach their full potential as a consequence of factors such as illegal harvesting, regulations that legally allow detrimental harvesting, or emigration of animals outside boundaries because of continuous habitat or inadequate size of reserve. Here we show that the conservation benefits of 87 MPAs investigated worldwide increase exponentially with the accumulation of five key features: no take, well enforced, old (>10 years), large (>100[thinsp]km2), and isolated by deep water or sand. Using effective MPAs with four or five key features as an unfished standard, comparisons of underwater survey data from effective MPAs with predictions based on survey data from fished coasts indicate that total fish biomass has declined about two-thirds from historical baselines as a result of fishing. Effective MPAs also had twice as many large (>250[thinsp]mm total length) fish species per transect, five times more large fish biomass, and fourteen times more shark biomass than fished areas. Most (59%) of the MPAs studied had only one or two key features and were not ecologically distinguishable from fished sites. Our results show that global conservation targets based on area alone will not optimize protection of marine biodiversity. More emphasis is needed on better MPA design, durable management and compliance to ensure that MPAs achieve their desired conservation value.

25 September 2013 in Nature
Verified
Journal Article
Closed access
RSRick D. Stuart-Smith
Rick D. Stuart-Smith
ABAmanda E. Bates
Amanda E. Bates
Jonathan S. LefcheckJonathan S. Lefcheck
Jonathan S. Lefcheck
JDJ. Emmett Duffy
J. Emmett Duffy
SBSusan Baker
Susan Baker
GEGraham J. Edgar
Graham J. Edgar

1 May 2014 in Biological Conservation
Verified
Journal Article
Closed access
TBTomas J. Bird
Tomas J. Bird
ABAmanda E. Bates
Amanda E. Bates
Jonathan S. LefcheckJonathan S. Lefcheck
Jonathan S. Lefcheck
NHNicole A. Hill
Nicole A. Hill
Russell ThomsonRussell Thomson
Russell Thomson
SFStewart Frusher
Stewart Frusher

3 February 2015 in Molecular Psychiatry
Verified
Journal Article
Open access
PDF file
GDG Davies
G Davies
NAN Armstrong
N Armstrong
JBJ C Bis
J C Bis
JBJ Bressler
J Bressler
VCV Chouraki
V Chouraki
IDIan Deary
Ian Deary
General cognitive function is substantially heritable across the human life course from adolescence to old age. We investigated the genetic contribution to variation in this important, health- and well-being-related trait in middle-aged and older adults. We conducted a meta-analysis of genome-wide association studies of 31 cohorts (N=53 949) in which the participants had undertaken multiple, diverse cognitive tests. A general cognitive function phenotype was tested for, and created in each cohort by principal component analysis. We report 13 genome-wide significant single-nucleotide polymorphism (SNP) associations in three genomic regions, 6q16.1, 14q12 and 19q13.32 (best SNP and closest gene, respectively: rs10457441, P=3.93 × 10−9, MIR2113; rs17522122, P=2.55 × 10−8, AKAP6; rs10119, P=5.67 × 10−9, APOE/TOMM40). We report one gene-based significant association with the HMGN1 gene located on chromosome 21 (P=1 × 10−6). These genes have previously been associated with neuropsychiatric phenotypes. Meta-analysis results are consistent with a polygenic model of inheritance. To estimate SNP-based heritability, the genome-wide complex trait analysis procedure was applied to two large cohorts, the Atherosclerosis Risk in Communities Study (N=6617) and the Health and Retirement Study (N=5976). The proportion of phenotypic variation accounted for by all genotyped common SNPs was 29% (s.e.=5%) and 28% (s.e.=7%), respectively. Using polygenic prediction analysis, ~1.2% of the variance in general cognitive function was predicted in the Generation Scotland cohort (N=5487; P=1.5 × 10−17). In hypothesis-driven tests, there was significant association between general cognitive function and four genes previously associated with Alzheimer’s disease: TOMM40, APOE, ABCG1 and MEF2C.

20 June 2000 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Closed access
PDF file
Russell ThomsonRussell Thomson
Russell Thomson
JPJonathan K. Pritchard
Jonathan K. Pritchard
PSPeidong Shen
Peidong Shen
POPeter J. Oefner
Peter J. Oefner
MFMarcus W. Feldman
Marcus W. Feldman
We consider a data set of DNA sequence variation at three Y chromosome genes (SMCY, DBY, and DFFRY) in a worldwide sample of human Y chromosomes. Between 53 and 70 chromosomes were fully screened for sequence variation at each locus by using the method of denaturing high-performance liquid chromatography. The sum of the lengths of the three genes is 64,120 bp. We have used these data to study the ancestral genealogy of human Y chromosomes. In particular, we focused on estimating the expected time to the most recent common ancestor and the expected ages of certain mutations with interesting geographic distributions. Although the geographic structure of the inferred haplotype tree is reminiscent of that obtained for other loci (the root is in Africa, and most of the oldest non-African lineages are Asian), the expected time to the most recent common ancestor is remarkably short, on the order of 50,000 years. Thus, although previous studies have noted that Y chromosome variation shows extreme geographic structure, we estimate that the spread of Y chromosomes out of Africa is much more recent than previously was thought. We also show that our data indicate substantial population growth in the effective number of human Y chromosomes.

19 October 2010 in Circulation
Verified
Journal Article
Closed access
PDF file
CMCostan G. Magnussen
Costan G. Magnussen
JKJuha Koskinen
Juha Koskinen
WCWei Chen
Wei Chen
Russell ThomsonRussell Thomson
Russell Thomson
MSMichael D. Schmidt
Michael D. Schmidt
OROlli T. Raitakari
Olli T. Raitakari
Background—: The clinical utility of identifying pediatric metabolic syndrome (MetS) is controversial. This study sought to determine the status of pediatric MetS as a risk factor for adult subclinical atherosclerosis (carotid intima-media thickness [cIMT]) and type 2 diabetes mellitus (T2DM) and compare and contrast this prediction with its individual components. Methods and Results—: Using data from the population-based, prospective, observational Bogalusa Heart and Cardiovascular Risk in Young Finns studies, we examined the utility of 4 categorical definitions of youth MetS and their components in predicting adult high cIMT and T2DM among 1781 participants aged 9 to 18 years at baseline (1984 to 1988) who were then examined 14 to 27 years later (2001–2007) when aged 24 to 41 years. Youth with MetS were at 2 to 3 times the risk of having high cIMT and T2DM as adults compared with those free of MetS at youth. Risk estimates with the use of high body mass index were similar to those of MetS phenotypes in predicting adult outcomes. Comparisons of area under the receiver operating characteristic curve and net reclassification index suggested that prediction of adult MetS, high cIMT, and T2DM in adulthood with the use of youth MetS was either equivalent or inferior to classification based on high body mass index or overweight and obesity. Conclusions—: Youth with MetS are at increased risk of meaningful adult outcomes; however, the simplicity of screening for high BMI or overweight and obesity in the pediatric setting offers a simpler, equally accurate alternative to identifying youth at risk of developing adult MetS, high cIMT, or T2DM.