Deeba Kamil

Dr. Deeba Kamil


Research Focus & Metrics

Academic Career Length

12Years (2015-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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16 November 2021 in Archives of Phytopathology and Plant Protection
Verified
Journal Article
Closed access
RGR. Gangaraj
R. Gangaraj
ANA. Nagaraja
A. Nagaraja
SGSwati Gaba
Swati Gaba
ADAmrita Das
Amrita Das
PRPrameeladevi
Prameeladevi
DKDeeba Kamil
Deeba Kamil
The objective of the study was to identify and characterise Fusarium species associated with guava wilt disease. A total of 50 root and soil samples were collected from Guava orchards located in different regions of India. Fusarium species were isolated, identified and categorised into 4 distinct species i.e. Fusarium oxysporum (44.31%), F. solani (36.36%), F. verticillioides (12.5%) & F. chlamydosporum (6.81%) based on the cultural characters and microscopic observations. Translation elongation factor 1-alpha (TEF-1α) gene fragment of 650 bp was sequenced for 32 representative isolates and they were confirmed as F. oxysporum f. sp. psidii, F. verticillioides, F. chlamydosporum & F. falciforme. All four species were tested individually for pathogenicity assays but, only F. oxysporum f. sp. psidii & F. falciforme confirmed with pathogenicity and proved as causal organisms of guava wilt disease in India. F. falciforme is being reported first time in India as a causal organism of guava wilt.

16 January 2023 in Journal of Fungi
Verified
Journal Article
Open access
PDF file
SPSHRINIKETAN PURANIK
SHRINIKETAN PURANIK
LSLIVLEEN SHUKLA
LIVLEEN SHUKLA
AKAditi Kundu
Aditi Kundu
DKDeeba Kamil
Deeba Kamil
SPSangeeta Paul
Sangeeta Paul
Ajay KumarAjay Kumar
Ajay Kumar
Di-n-butyl phthalate (DBP) is one of the most extensively used plasticizers for providing elasticity to plastics. Being potentially harmful to humans, investigating eco-benign options for its rapid degradation is imperative. Microbe-mediated DBP mineralization is well-recorded, but studies on the pollutant’s fungal catabolism remain scarce. Thus, the present investigation was undertaken to exploit the fungal strains from toxic sanitary landfill soil for the degradation of DBP. The most efficient isolate, SDBP4, identified on a molecular basis as Aspergillus flavus, was able to mineralize 99.34% dibutyl phthalate (100 mg L−1) within 15 days of incubation. It was found that the high production of esterases by the fungal strain was responsible for the degradation. The strain also exhibited the highest biomass (1615.33 mg L−1) and total soluble protein (261.73 µg mL−1) production amongst other isolates. The DBP degradation pathway scheme was elucidated with the help of GC-MS-based characterizations that revealed the formation of intermediate metabolites such as benzyl-butyl phthalate (BBP), dimethyl-phthalate (DMP), di-iso-butyl-phthalate (DIBP) and phthalic acid (PA). This is the first report of DBP mineralization assisted with A. flavus, using it as a sole carbon source. SDBP4 will be further formulated to develop an eco-benign product for the bioremediation of DBP-contaminated toxic sanitary landfill soils.

25 November 2024 in Smart Agricultural Technology
Verified
Journal Article
Open access
SCSourav Chakrabarty
Sourav Chakrabarty
SPShashank PR
Shashank PR
CDChandan Kumar Deb
Chandan Kumar Deb
MHMd Ashraful Haque
Md Ashraful Haque
PTPradyuman Thakur
Pradyuman Thakur
MDMukesh Kumar Dhillon
Mukesh Kumar Dhillon

24 April 2023 in Frontiers in Microbiology
Verified
Journal Article
Open access
RGR. Gangaraj
R. Gangaraj
AKAditi Kundu
Aditi Kundu
VRVirendra Singh Rana
Virendra Singh Rana
ADAmrita Das
Amrita Das
GCGautham Chawla
Gautham Chawla
DKDeeba Kamil
Deeba Kamil
Bio-control agents are the best alternative to chemicals for the successful management of plant diseases. The fungus Aspergillus niger is known to produce diverse metabolites with antifungal activity, attracting researchers to exploit it as a bio-control agent for plant disease control. In the present study, 11 A. niger strains were isolated and screened for their antagonism against the guava wilt pathogen under in vitro and in planta conditions. Strains were identified morphologically and molecularly by sequencing the internal transcribed spacer (ITS), β-tubulin, and calmodulin genes. The strains were evaluated through dual culture, volatile, and non-volatile methods under an in vitro study. AN-11, AN-6, and AN-2 inhibited the test pathogen Fusarium oxysporum f. sp. psidii (FOP) at 67.16%, 64.01%, and 60.48%, respectively. An in planta study was conducted under greenhouse conditions with 6 months old air-layered guava plants (var. Allahabad Safeda) by pre- and post-inoculation of FOP. The AN-11 strain was found to be effective under both pre- and post-inoculation trials. Furthermore, gas chromatography–mass spectrometry (GC–MS) analysis was carried out to characterize the volatile compounds of the most potential strain, A. niger. The hexane soluble fraction showed the appearance of characteristic peaks of hexadecenoic acid methyl ester (4.41%), 10-octadecanoic acid methyl ester (3.79%), dodecane (3.21%), undecane (3.19%), gibepyrone A (0.15%), 3-methylundecane (0.36%), and citroflex A (0.38%). The ethyl acetate fraction of the bio-control fungi revealed the occurrence of major antifungal compounds, such as acetic acid ethyl ester (17.32%), benzopyron-4-ol (12.17%), 1,2,6-hexanetriol (7.16%), 2-propenoic acid ethanediyl ester (2.95%), 1-(3-ethyloxiranyl)-ethenone (0.98%), 6-acetyl-8-methoxy dimethyl chromene (0.96%), 4-hexyl-2,5-dihydro dioxo furan acetic acid (0.19%), and octadecanoic acid (1.11%). Furthermore, bio-control abilities could be due to hyper-parasitism, the production of secondary metabolites, and competition for sites and nutrients. Indeed, the results will enrich the existing knowledge of metabolomic information and support perspectives on the bio-control mechanism of A. niger.

10 October 2023 in Horticulturae
Verified
Journal Article
Open access
PDF file
SCShanmugaraj C
Shanmugaraj C
DKDeeba Kamil
Deeba Kamil
AKAditi Kundu
Aditi Kundu
PSPraveen Kumar Singh
Praveen Kumar Singh
ADAmrita Das
Amrita Das
MCM. Chaithra
M. Chaithra
Bio-control agents are the best alternative to chemicals for the successful management of plant diseases. Among them, Trichoderma is commonly used as a biological control agent in plant disease management due to its ability to suppress soil-borne plant pathogens. In the present study, 20 Trichoderma asperellum isolates were collected from different geographical locations and confirmed using morphological characteristics and molecular phylogenetic inferences based on combined ITS and β-tubulin sequences. All twenty isolates were screened for their antagonism against the collar rot pathogen under in vitro and in planta conditions. The isolates were evaluated through dual culture and volatile methods in an in vitro study. Isolate A10 inhibited the test pathogen Agroathelia rolfsii at 94.66% in a dual culture assay and 70.95% in a volatile assay, followed by the isolates A11 and A17, which recorded 82.64% and 81.19% in dual culture assay and 63.75% and 68.27% in the volatile assay respectively. An in planta study was conducted under greenhouse conditions in tomato var. pusa ruby by pre- and post-inoculation of T. asperellum isolates in the A. rolfsii infected soil to evaluate their antagonistic potential against the disease. The A10 isolate was found effective under both pre- and post-inoculation conditions, with a disease inhibition percent of 86.17 and 80.60, respectively, followed by the isolates A11 and A17, which exhibited inhibition of 77.80% and 75.00% in pre-inoculation and 72.22% and 69.44% in post-inoculation, respectively. Further, biochemical analysis was conducted to determine the specific activity of hydrolytic enzymes produced by T. asperellum during interaction with A. rolfsii. We found that isolate A10 produces more hydrolytic enzymes with the specific activity of 174.68 IU/mg of β-1,3 glucanase, 183.48 IU/mg of β-1, 4 glucanase, 106.06 IU/mg of protease, followed by isolate A17, A11 respectively. In GC-MS analysis, we observed maximum anti-microbial volatile organic compounds from the isolate A10, including 2H-Pyran-2-one (17.39%), which was found to be most abundant, followed by dienolactone (8.43%), α-pyrone (2.19%), and harziandione (0.24%) respective retention time of 33.48, 33.85, 33.39, and 64.23 min, respectively, compared to other isolates. In the TLC assay, we observed that a greater number of bands were produced by the A10 and A17 isolates in the Hexane: Ethyl Acetate (1:1) solvent system than in the 9:1 solvent system, which represents the presence of major metabolites in the ethyl acetate extract.

11 October 2022 in Frontiers in Microbiology
Verified
Journal Article
Open access
MCM. Chaithra
M. Chaithra
TPT. Prameeladevi
T. Prameeladevi
SBS. N. Bhagyasree
S. N. Bhagyasree
LPL. Prasad
L. Prasad
SSS. Subramanian
S. Subramanian
DKDeeba Kamil
Deeba Kamil
Beauveria bassiana is an entomopathogenic fungus that causes the white muscadine disease in insects. The majority of entomopathogenic fungi are soil and insect borne, 15 soil samples were collected from seven different locations during 2021, from January to December. Similarly, during 2022, March to December, 15 fungus-infected insect specimens were collected from five different locations hence soil and insect samples from various ecosystems were collected. As a result, 30 B. bassiana isolates from 11 different geographical areas were identified using morphological characteristics and multilocus sequence data in this investigation. The taxonomical positions of the isolates were determined using morphological characteristics and phylogenetic inferences based on three loci (Internal Transcribed Sequence, Elongation Factor-1α, and B. bassiana chitinase 1). In phylogenetic analysis of B. bassiana, the Maximum Likelihood analytical method produced distinct tree topology when compared to Neighbor-joining and minimum evolution. Three isolates viz., Bb3, Bb7 and Bb20 were found closely linked with reference isolate (KTU-24) and other showed the higher population diversity among them. The genetic distances of 30 B. bassiana isolates revealed that 15 were not closely related (D varied from 0.003 to 0.036). The pathogenicity of B. bassiana isolates from various hosts along with one commercial formulation (Beveroz) was assessed against Tetranychus truncatus under in vitro conditions by a completely randomized design (CRD) experiment. The same experiment was repeated thrice to confirm the pathogenicity of B. bassiana against T. truncatus. Later, the collected T. truncatus mortality data was converted into corrected mortality by using the Abbott formula and the values were examined using analysis of variance (ANOVA) in SPSS 23.0 software. Duncan’s Multiple Comparison Test was also done to compare the percentage mortality rates among the 30 B. bassiana isolates. The recorded results showed that the Bb6, Bb15 and Bb12 isolates caused significantly higher mortality of T. truncatus, i.e., 97.73, 96.73 and 94.50% respectively, than the other isolates. This study showed the relativeness among the B. bassiana isolates and establishes their bio-efficacy against T. truncatus, which further can be used for commercialization as bio-pesticide.