Matthew Hyndman

Dr. Matthew Hyndman


Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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19 April 2018 in Biomolecules
Verified
Journal Article
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MAMauricio Arias
Mauricio Arias
KPKathlyn B. Piga
Kathlyn B. Piga
MHMatthew Hyndman
Matthew Hyndman
HVHans Vogel
Hans Vogel
Antimicrobial peptides (AMPs) constitute a promising alternative for the development of new antibiotics that could potentially counteract the growing number of antibiotic-resistant bacteria. However, the AMP structure–function relationships remain unclear and detailed studies are still necessary. The positively charged amino acid residues (Arg and Lys) play a crucial role in the activity of most AMPs due to the promotion of electrostatic interactions between the peptides and bacterial membranes. In this work we have analyzed the antimicrobial and structural properties of several Trp-rich AMPs containing exclusively either Arg or Lys as the positively charged residues. Their antimicrobial activity and mechanism of action were investigated, showing that Lys residues give rise to a reduced antimicrobial potency for most peptides, which was correlated, in turn, with a decrease in their ability to permeabilize the cytoplasmic membrane of Escherichia coli. Additionally, the presence of Arg and Lys renders the peptides susceptible to degradation by proteases, such as trypsin, limiting their therapeutic use. Therefore, modifications of the side chain length of Arg and Lys were investigated in an attempt to improve the protease resistance of AMPs. This approach resulted in enhanced stability to trypsin digestion, and in several cases, shorter sidechains conserved or even improved the antimicrobial activity. All together, these results suggest that Arg-to-Lys substitutions, coupled with side chain length modifications, can be extremely useful for improving the activity and stability of AMPs.

3 February 2017 in Metabolites
Verified
Journal Article
Open access
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OFOLUYEMI FALEGAN
OLUYEMI FALEGAN
MBMark Ball
Mark Ball
RSRustem A. Shaykhutdinov
Rustem A. Shaykhutdinov
PPPhillip M. Pieroraio
Phillip M. Pieroraio
FFFarshad Farshidfar
Farshad Farshidfar
MHMatthew Hyndman
Matthew Hyndman
Renal cell carcinoma (RCC) is a heterogeneous disease that is usually asymptomatic until late in the disease. There is an urgent need for RCC specific biomarkers that may be exploited clinically for diagnostic and prognostic purposes. Preoperative fasting urine and serum samples were collected from patients with clinical renal masses and assessed with 1H NMR and GCMS (gas chromatography-mass spectrometry) based metabolomics and multivariate statistical analysis. Alterations in levels of glycolytic and tricarboxylic acid (TCA) cycle intermediates were detected in RCC relative to benign masses. Orthogonal Partial Least Square Discriminant Analysis plots discriminated between benign vs. pT1 (R2 = 0.46, Q2 = 0.28; AUC = 0.83), benign vs. pT3 (R2 = 0.58, Q2 = 0.37; AUC = 0.87) for 1H NMR-analyzed serum and between benign vs. pT1 (R2 = 0.50, Q2 = 0.37; AUC = 0.83), benign vs. pT3 (R2 = 0.72, Q2 = 0.68, AUC = 0.98) for urine samples. Separation was observed between benign vs. pT3 (R2 = 0.63, Q2 = 0.48; AUC = 0.93), pT1 vs. pT3 (R2 = 0.70, Q2 = 0.54) for GCMS-analyzed serum and between benign vs. pT3 (R2Y = 0.87; Q2 = 0.70; AUC = 0.98) for urine samples. This pilot study suggests that urine and serum metabolomics may be useful in differentiating benign renal tumors from RCC and for staging RCC.

2 August 2021 in JAMA Network Open
Verified
Journal Article
Open access
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GNGregg Nelson
Gregg Nelson
XWXiaoming Wang
Xiaoming Wang
ANAlison Nelson
Alison Nelson
PFPeter Faris
Peter Faris
LLLaura Lagendyk
Laura Lagendyk
LGLeah Gramlich
Leah Gramlich
Enhanced Recovery After Surgery (ERAS) is a global surgical quality improvement program that involves evidence-based guidelines and implementation strategies designed to improve patient outcomes by engaging multidisciplinary care teams in surgical practice change.1 An increasing body of evidence has demonstrated the effectiveness of systemwide implementation of ERAS in improving patient outcomes while achieving cost savings in colorectal surgery2-5 and other disciplines.6 Benefits include decreased hospital length of stay (LOS) and decreased complications, with no significant increase in readmission or mortality rates.1 Economic evaluation of ERAS has demonstrated its cost-effectiveness and supported expansion across surgical disciplines with return on investment ratios as high as 7.3.7

1 July 2018 in Heliyon
Verified
Journal Article
Open access
AKAhmed Kotb
Ahmed Kotb
MHMatthew Hyndman
Matthew Hyndman
TPTrushar R Patel
Trushar R Patel
Focal adhesions are highly dynamic multi-protein complexes found at the cell surface and effectively link the cell's internal cytoskeleton to a complex mixture of macromolecules known as the extracellular matrix and mediate transmission of signals from the extracellular matrix to the nucleus. Zyxin is one of the key focal adhesion proteins and is also found to shuttle in the nucleus. Although the mechanism of shuttling to the nucleus unclear, it moves out from the nucleus through a leucine-rich nuclear export signal sequence. It is known to contribute to fundamental cellular activities such as cell migration, adhesion and proliferation by interacting with a variety of cellular proteins. It is also linked with a number of cancers such as melanoma, hepatocellular carcinoma, oral squamous-cell carcinoma, Ewing sarcoma and prostate cancer. However, in many cases, the precise mechanisms by which the absence or presence of zyxin contributes to cancer progression or suppression is unknown. Thus, more work is required to gain insights into how zyxin modulates cellular functions in relationship to cancer. This review summarises the role of zyxin in cancer, with an emphasis on conflicting roles in prostate cancer.

28 May 2018 in World Journal of Urology
Verified
Journal Article
Closed access
PDF file
AKAhmed Fouad Kotb
Ahmed Fouad Kotb
SSShelley Spaner
Shelley Spaner
TCTrafford Crump
Trafford Crump
MHMatthew Hyndman
Matthew Hyndman