Inactivation of host Rho GTPases is a widespread strategy employed by bacterial pathogens to manipulate mammalian cellular functions and avoid immune defenses. Some bacterial toxins mimic eukaryotic Rho GTPase-activating proteins (GAPs) to inactivate mammalian GTPases, probably as a result of evolutionary convergence. An intriguing question remains whether eukaryotic pathogens or parasites may use endogenous GAPs as immune-suppressive toxins to target the same key genes as bacterial pathogens. Interestingly, a RhoGAP domain–containing protein, LbGAP, was recently characterized from the parasitoid wasp Leptopilina boulardi, and shown to protect parasitoid eggs from the immune response of Drosophila host larvae. We demonstrate here that LbGAP has structural characteristics of eukaryotic RhoGAPs but that it acts similarly to bacterial RhoGAP toxins in mammals. First, we show by immunocytochemistry that LbGAP enters Drosophila immune cells, plasmatocytes and lamellocytes, and that morphological changes in lamellocytes are correlated with the quantity of LbGAP they contain. Demonstration that LbGAP displays a GAP activity and specifically interacts with the active, GTP-bound form of the two Drosophila Rho GTPases Rac1 and Rac2, both required for successful encapsulation of Leptopilina eggs, was then achieved using biochemical tests, yeast two-hybrid analysis, and GST pull-down assays. In addition, we show that the overall structure of LbGAP is similar to that of eukaryotic RhoGAP domains, and we identify distinct residues involved in its interaction with Rac GTPases. Altogether, these results show that eukaryotic parasites can use endogenous RhoGAPs as virulence factors and that despite their differences in sequence and structure, eukaryotic and bacterial RhoGAP toxins are similarly used to target the same immune pathways in insects and mammals. Recent data have highlighted strong similarities between insect and mammalian immune pathways, raising the question whether they might be similarly targeted by parasites/pathogens. Endoparasitoid wasps are insect mortality agents that perform their development inside their host. They are widely used in biological control, but little is known of the way in which they disable the host immune response. Here, we report the first characterization to our knowledge of a protein–protein interaction between a parasitoid immune-suppressive factor, LbGAP, and its host targets, thus explaining its physiological effects on host immune cells. Strikingly, bacterial toxins containing a domain functionally related to that of LbGAP are known to alter human macrophages by targeting the same molecules. Demonstration that insect and mammalian pathogens/parasites, whether eukaryotic or prokaryotic, can use evolutionary convergent molecules “built” to target the same key factors in immune pathways, represents a new step in understanding the evolution of host–pathogen interactions. In addition to the potential of discovering new bioinsectides, studying virulence strategies of insect parasites might thus help to better characterize vertebrate–pathogen interactions and to assess the role of evolutionary convergence in the evolution of virulence.