Rui Zhang

Prof. Dr. Rui Zhang

orcid

Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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5 August 2021 in Biomolecules
Verified
Journal Article
Open access
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Quaid HussainQuaid Hussain
Quaid Hussain
Muhammad AsimMuhammad Asim
Muhammad Asim
RZRui Zhang
Rui Zhang
RKRayyan Khan
Rayyan Khan
SFSaqib Farooq
Saqib Farooq
JWJiasheng Wu
Jiasheng Wu
Among abiotic stressors, drought and salinity seriously affect crop growth worldwide. In plants, research has aimed to increase stress-responsive protein synthesis upstream or downstream of the various transcription factors (TFs) that alleviate drought and salinity stress. TFs play diverse roles in controlling gene expression in plants, which is necessary to regulate biological processes, such as development and environmental stress responses. In general, plant responses to different stress conditions may be either abscisic acid (ABA)-dependent or ABA-independent. A detailed understanding of how TF pathways and ABA interact to cause stress responses is essential to improve tolerance to drought and salinity stress. Despite previous progress, more active approaches based on TFs are the current focus. Therefore, the present review emphasizes the recent advancements in complex cascades of gene expression during drought and salinity responses, especially identifying the specificity and crosstalk in ABA-dependent and -independent signaling pathways. This review also highlights the transcriptional regulation of gene expression governed by various key TF pathways, including AP2/ERF, bHLH, bZIP, DREB, GATA, HD-Zip, Homeo-box, MADS-box, MYB, NAC, Tri-helix, WHIRLY, WOX, WRKY, YABBY, and zinc finger, operating in ABA-dependent and -independent signaling pathways.

1 May 2019 in GigaScience
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Journal Article
Open access
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YHYoujun Huang
Youjun Huang
LXLihong Xiao
Lihong Xiao
ZZZhongren Zhang
Zhongren Zhang
RZRui Zhang
Rui Zhang
ZWZhengjia Wang
Zhengjia Wang
JHJianqin Huang
Jianqin Huang
Pecan (Carya illinoinensis) and Chinese hickory (C. cathayensis) are important commercially cultivated nut trees in the genus Carya (Juglandaceae), with high nutritional value and substantial health benefits. We obtained >187.22 and 178.87 gigabases of sequence, and ∼288× and 248× genome coverage, to a pecan cultivar (“Pawnee”) and a domesticated Chinese hickory landrace (ZAFU-1), respectively. The total assembly size is 651.31 megabases (Mb) for pecan and 706.43 Mb for Chinese hickory. Two genome duplication events before the divergence from walnut were found in these species. Gene family analysis highlighted key genes in biotic and abiotic tolerance, oil, polyphenols, essential amino acids, and B vitamins. Further analyses of reduced-coverage genome sequences of 16 Carya and 2 Juglans species provide additional phylogenetic perspective on crop wild relatives. Cooperative characterization of these valuable resources provides a window to their evolutionary development and a valuable foundation for future crop improvement.

6 January 2025 in Nature Climate Change
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Journal Article
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JWJinmei Wang
Jinmei Wang
HHHao Hua
Hao Hua
JGJing Guo
Jing Guo
XHXu Huang
Xu Huang
XZXin Zhang
Xin Zhang
LCLei Chen
Lei Chen

2 April 2021 in New Phytologist
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Journal Article
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PJPawan Kumar Jewaria
Pawan Kumar Jewaria
HHHeikki Hänninen
Heikki Hänninen
XLXiaojuan Li
Xiaojuan Li
RBRishikesh P. Bhalerao
Rishikesh P. Bhalerao
RZRui Zhang
Rui Zhang
Summary: Endodormancy and the related chilling requirement synchronize the seasonal development of trees from the boreal and temperate regions under the climatic conditions prevailing at their native growing sites. The phenomenon of endodormancy has been known at the whole‐plant level for 100 years, and in the last couple of decades, insights into the physiological and molecular basis of endodormancy and its release have also been obtained. Intriguingly, recent studies have shown experimentally that subtropical trees also show endodormancy and a chilling requirement. Motivated by the climatic differences between the subtropical and more northern zones, here we address the similarities and differences in endodormancy between trees growing in the subtropical zone and those growing in more northern zones.

1 March 2021 in Agricultural and Forest Meteorology
Verified
Journal Article
Closed access
RZRui Zhang
Rui Zhang
JLJianhong Lin
Jianhong Lin
FWFucheng Wang
Fucheng Wang
SSSitian Shen
Sitian Shen
XWXaiobin Wang
Xaiobin Wang
HHHeikki Hänninen
Heikki Hänninen

23 October 2024 in Nature Communications
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Journal Article
Open access
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HQHaoyu Qiu
Haoyu Qiu
QYQin Yan
Qin Yan
YYYuchuan Yang
Yuchuan Yang
XHXu Huang
Xu Huang
JWJinmei Wang
Jinmei Wang
LCLei Chen
Lei Chen
Late spring frosts, occurring after spring phenological events, pose a dire threat to tree growth and forest productivity. With climate warming, earlier spring phenological events have become increasingly common and led to plants experiencing more frequent and severe frost damage. However, the effect of late spring frosts after leaf-out on subsequent flowering phenology in woody species remains unknown. Utilizing 572,734 phenological records of 640 species at 5024 sites from four long-term and large-scale in situ phenological networks across the Northern Hemisphere, we show that late spring frosts following leaf-out significantly delay the onset of the subsequent flowering by approximately 6.0 days. Late-leafing species exhibit greater sensitivity to the frosts than early-leafing species, resulting in a longer delay of 2.5 days in flowering. Trees in warm regions and periods exhibit a more pronounced frost-induced flowering delay compared to those in cold regions and periods. A significant increase in the frequency of late spring frost occurrence is observed in recent decades. Our findings elucidate the intricate relationships among leaf-out, frost, and flowering but also emphasize that the sequential progression of phenological events, rather than individual phenological stages, should be considered when assessing the phenological responses to climate change.