Yi Guo

Dr. Yi Guo

Department of Health Outcomes and Biomedical Informatics, University of Florida, Gainesville, FL 32610, USA
orcid

Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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16 November 2023 in npj Digital Medicine
Verified
Journal Article
Open access
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CPCheng Peng
Cheng Peng
XYXi Yang
Xi Yang
ACAokun Chen
Aokun Chen
KSKaleb E. Smith
Kaleb E. Smith
NPNima PourNejatian
Nima PourNejatian
Yonghui WuYonghui Wu
Yonghui Wu
There are enormous enthusiasm and concerns in applying large language models (LLMs) to healthcare. Yet current assumptions are based on general-purpose LLMs such as ChatGPT, which are not developed for medical use. This study develops a generative clinical LLM, GatorTronGPT, using 277 billion words of text including (1) 82 billion words of clinical text from 126 clinical departments and approximately 2 million patients at the University of Florida Health and (2) 195 billion words of diverse general English text. We train GatorTronGPT using a GPT-3 architecture with up to 20 billion parameters and evaluate its utility for biomedical natural language processing (NLP) and healthcare text generation. GatorTronGPT improves biomedical natural language processing. We apply GatorTronGPT to generate 20 billion words of synthetic text. Synthetic NLP models trained using synthetic text generated by GatorTronGPT outperform models trained using real-world clinical text. Physicians’ Turing test using 1 (worst) to 9 (best) scale shows that there are no significant differences in linguistic readability (p = 0.22; 6.57 of GatorTronGPT compared with 6.93 of human) and clinical relevance (p = 0.91; 7.0 of GatorTronGPT compared with 6.97 of human) and that physicians cannot differentiate them (p < 0.001). This study provides insights into the opportunities and challenges of LLMs for medical research and healthcare.

13 July 2020 in Nature Machine Intelligence
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Journal Article
Closed access
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MPMattia Prosperi
Mattia Prosperi
Yi GuoYi Guo
Yi Guo
MSMatt Sperrin
Matt Sperrin
JKJames S. Koopman
James S. Koopman
JMJae S. Min
Jae S. Min
Jiang BianJiang Bian
Jiang Bian

31 July 2013 in BMC Medical Research Methodology
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Journal Article
Open access
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Yi GuoYi Guo
Yi Guo
HLHenrietta L Logan
Henrietta L Logan
DGDeborah H Glueck
Deborah H Glueck
KMKeith E Muller
Keith E Muller
Many researchers favor repeated measures designs because they allow the detection of within-person change over time and typically have higher statistical power than cross-sectional designs. However, the plethora of inputs needed for repeated measures designs can make sample size selection, a critical step in designing a successful study, difficult. Using a dental pain study as a driving example, we provide guidance for selecting an appropriate sample size for testing a time by treatment interaction for studies with repeated measures. We describe how to (1) gather the required inputs for the sample size calculation, (2) choose appropriate software to perform the calculation, and (3) address practical considerations such as missing data, multiple aims, and continuous covariates.

13 February 2018 in Health and Quality of Life Outcomes
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Journal Article
Open access
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THTianyao Huo
Tianyao Huo
Yi GuoYi Guo
Yi Guo
ESElizabeth A. Shenkman
Elizabeth A. Shenkman
KMKeith Muller
Keith Muller
Although Short Form (SF)-12 × 2® has been extensively studied and used as a valid measure of health-related quality of life in a variety of population groups, no systematic studies have described the reliability of the measure in patients with behavioral conditions or serious mental illness (SMI). We assessed the internal consistency, split-half reliability and annual test-retest correlations in a sample of 1587 participants with either a combination of physical and behavioral conditions or SMI. The Mosier’s alpha was 0.70 for the Physical Composite Scale (PCS) and 0.69 for the Mental Health Composite Scale (MCS), indicating good internal consistency. We observed strong correlations between physical functioning, physical role and body pain scales (r = 0.55–0.56), and between social functioning, emotional role, and mental health (r = 0.53–0.58). We calculated split-half reliabilities to be 0.74 for physical functioning, 0.75 for physical role, 0.73 for emotional role and 0.65 for mental health respectively. We assessed the annual test-retest correlation using intraclass correlation (ICC) and found an ICC of 0.61 for PCS and 0.57 for MCS composite scores, adjusting for age, sex, race/ethnicity, and CRG. We found no decline in the correlations between baseline and the following study years until year 3. Our results encourage using SF-12v2® to assess health-related quality of life in the Medicaid population with combined physical and behavioral conditions or similar cohorts. The WIN study was registered with clinicaltrials.gov on April 22, 2015. Trial registration number: NCT02440906 . Retrospectively registered.

1 July 2014 in American Journal of Public Health
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Journal Article
Closed access
Yi GuoYi Guo
Yi Guo
HLHenrietta L. Logan
Henrietta L. Logan
VDVirginia J. Dodd
Virginia J. Dodd
KMKeith E. Muller
Keith E. Muller
JMJohn G. Marks
John G. Marks
JRJoseph L. Riley
Joseph L. Riley
Objectives. We examined whether health literacy was associated with self-rated oral health status and whether the relationship was mediated by patient–dentist communication and dental care patterns. Methods. We tested a path model with data collected from 2 waves of telephone surveys (baseline, 2009–2010; follow-up, 2011) of individuals residing in 36 rural census tracts in northern Florida (final sample size n = 1799). Results. Higher levels of health literacy were associated with better self-rated oral health status (B = 0.091; P < .001). In addition, higher levels of health literacy were associated with better patient–dentist communication, which in turn corresponded with patterns of regular dental care and better self-rated oral health (B = 0.003; P = .01). Conclusions. Our study showed that, beyond the often-reported effects of gender, race, education, financial status, and access to dental care, it is also important to consider the influence of health literacy and quality of patient–dentist communication on oral health status. Improved patient–dentist communication is needed as an initial step in improving the population’s oral health.

1 March 2017 in JACC
Verified
Journal Article
Closed access
MDMark D. DeBoer
Mark D. DeBoer
MGMatthew J. Gurka
Matthew J. Gurka
SGSherita Hill Golden
Sherita Hill Golden
SMSolomon K. Musani
Solomon K. Musani
MSMario Sims
Mario Sims
TPThomas A. Pearson
Thomas A. Pearson