Dmitry M Atopkin

Dr. Dmitry M Atopkin

Federal Scientific Center of the East Asia Terrestrial Biodiversity FEB RAS, Vladivostok, Primorskiy Kray, Russia

Research Focus & Metrics

Academic Career Length

20Years (2007-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
22 June 2016 in Journal of Helminthology
Verified
Journal Article
Closed access
PDF file
DADmitry M Atopkin
Dmitry M Atopkin
VBV.V. Besprozvannykh
V.V. Besprozvannykh
HNH.D. Ngo
H.D. Ngo
NHN. Van Ha
N. Van Ha
NTN. Van Tang
N. Van Tang
ABA.Y. Beloded
A.Y. Beloded
Adults of Lasiotocus lizae Liu, 2002 (Monorchiidae) were found in the mullet Liza longimanus (Günther) from Tonkin Bay, near Cat Ba Island, Vietnam. In this region, flukes belonging to the genus Paucivitellosus (Bivesiculudae) were found in Liza subviridis (Valenciennes), Liza engeli (Bleeker) and Valamugil seheli (Forskåi). Results of investigations showed that morphological features of L. lizae (like L. glebulentus Overstreet, 1971) do not meet the criteria of the genus Lasiotocus. In addition, L. lizae is highly differentiated from other species of Lasiotocus from which molecular data were obtained, including L. arrhichostoma Searle, Cutmore et Cribb, 2014 and L. typicum (Nicoll, 1912). Phylogenetic analyses revealed that L. lizae differs considerably from other species of the genus Lasiotocus presented in the GenBank database. We have identified a new species of the genus Paucivitellosus–P. vietnamensis sp. n. – from L. subviridis, which differs from P. fragilis Coil, Reid et Kuntz, 1965 by metrical and molecular (18S rRNA) data, and from P. hanumanthai Mani, 1989 by metric features. Our results also show considerable molecular differentiation between P. vietnamensis sp. n. and Paucivitellosus spp. recovered from L. engeli and V. seheli in Vietnam.

1 January 2020 in The European Zoological Journal
Verified
Journal Article
Open access
YZYufeng Zhang
Yufeng Zhang
GGG. N. Ganin
G. N. Ganin
DADmitry M Atopkin
Dmitry M Atopkin
DWD. H. Wu
D. H. Wu
In the Sikhote-Alin and Changbai Mountains of the Amur River region, earthworms of genus Drawida inhabit the northern boundary of their natural habitat. They are represented by the epigeic and anecic life-forms, three steady colour morphs and eight valid species, yet the genetic lineages of 11 have yet to be described. Based on mt-COI gene fragment sequence data, epigeic and anecic earthworms are shown to differ from one another at the interspecific level. Polymorphism and genetic intraspecific diversity are an obligatory sign for a species in the refuge even at the boundary of its distribution where this species occupies new ecological niches. The original habitats of the ancient Drawida black morph were within the Paleo-Amur River basin in the Late Neogene. Today, the meadow-swampy drawidas protrude far north along the Amur River floodplain up to the border of the last freezing in this region in comparison to the forest earthworms. However, at similar northern latitudes such as the Kuril Islands and the Sakhalin, Drawida are absent, because the soil on these islands during the last Ice Age was permafrost. The black epigeic drawidas only live in the floodplain meadows. The grey and brown morphs of the anecic species live in same forest biotopes, where they inhabit different soil horizons.

17 February 2020 in Systematic Parasitology
Verified
Journal Article
Closed access
PDF file
DADmitry M Atopkin
Dmitry M Atopkin
Sergey SokolovSergey Sokolov
Sergey Sokolov
KVKonstantin S. Vainutis
Konstantin S. Vainutis
EVEkaterina L. Voropaeva
Ekaterina L. Voropaeva
MSMarina B. Shedko
Marina B. Shedko
ACAnindo Choudhury
Anindo Choudhury

1 December 2017 in Parasitology International
Verified
Journal Article
Closed access
DADmitry M Atopkin
Dmitry M Atopkin
VBV.V. Besprozvannykh
V.V. Besprozvannykh
ABA. Yu Beloded
A. Yu Beloded
HNH.D. Ngo
H.D. Ngo
NHN.V. Ha
N.V. Ha
NTN.V. Tang
N.V. Tang

26 November 2018 in Journal of Helminthology
Verified
Journal Article
Closed access
PDF file
DADmitry M Atopkin
Dmitry M Atopkin
MNM. Nakao
M. Nakao
VBV.V. Besprozvannykh
V.V. Besprozvannykh
NHN.D. Ha
N.D. Ha
HNH.V. Nguyen
H.V. Nguyen
MSM. Sasaki
M. Sasaki
Four representatives of the genus Lecithaster and one representative of the genus Hysterolecithoides were found during investigation of the trematode fauna of fish species in Vietnamese, Japanese and eastern coastal waters of the Russian Far East. Based on morphometric data, adult trematodes from Vietnamese Strongylura strongylura and Russian Acanthogobius flavimanus were identified as Lecithaster confusus, trematodes from Vietnamese Hemirhamphus marginatus as L. sayori and from osmerid fishes as L. salmonis. Further, a single specimen of Lecithaster sp. and representatives of Hysterolecithoides epinepheli were found in Vietnamese Siganus fuscescens. Morphological and molecular data, including 18S ribosomal DNA (rDNA) V4 fragment, 28S rDNA D1-D3 fragment, internal transcribed spacers (ITS) and a mitochondrial COI gene fragment were analysed for Lecithaster spp. The results revealed that L. sayori and L. salmonis are not synonyms of L. stellatus and L. gibbosus, respectively, but that Hysterolecithoides frontilatus and H. guangdongensis are junior synonyms of H. epinepheli. The 28S-rDNA-based phylogenetic tree of Hemiuroidea showed a distinct position for the genus Lecithaster with internal differentiation into three subclades, including L. confusus, L. sayori and Lecithaster sp. within the first subclade, L. mugilis and L. sudzuhensis within the second subclade and L. salmonis and L. gibbosus within the third subclade. Bayesian phylogenetic reconstructions of Hemiuroidea showed four clades for members of Hemiuridae and Lecithasteridae. The first clade consisted of Hemiuridae representatives and the second clade represented the genus Lecithaster. The third clade included genera Aponurus and Lecithophyllum (Lecithasteridae) and the fourth clade combined members of lecithasterid Quadrifoliovariinae and Hysterolecithinae and hemiurid Opisthadeninae and Bunocotylidae with high statistical support.