Petr Strakoš

Dr. Petr Strakoš

orcid

Research Focus & Metrics

Academic Career Length

12Years (2015-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 January 2017 in Advances in Engineering Software
Verified
Journal Article
Closed access
MJMilan Jaroš
Milan Jaroš
PSPetr Strakoš
Petr Strakoš
TKTomas Karasek
Tomas Karasek
LRLubomir Riha
Lubomir Riha
AVAlena Vašatová
Alena Vašatová
TKTomas Kozubek
Tomas Kozubek

5 July 2025 in Artificial Intelligence Review
Verified
Journal Article
Open access
PDF file
Khyati SethiaKhyati Sethia
Khyati Sethia
PSPetr Strakoš
Petr Strakoš
MJMilan Jaros
Milan Jaros
JKJan Kubicek
Jan Kubicek
JRJan Roman
Jan Roman
LRLubomir Riha
Lubomir Riha
Background and motivation: Liver segmentation plays a critical role in medical imaging, aiding in diagnosis, treatment planning, and surgical interventions for liver diseases. Precise segmentation of liver structures, including vessels, tumors, and other substructures, is essential for effective patient management. Traditional manual methods are time-consuming and prone to variability, prompting the development of automated techniques. This review aims to evaluate the evolution of liver segmentation methodologies, focusing on recent advancements in deep learning and hybrid approaches. Materials and methods: This review follows the PRISMA guidelines for systematic analysis, including a detailed database search across PubMed, Web of Science, Scopus, and IEEE Xplore. The search focused on segmentation techniques for various liver structures using deep learning, traditional methods, and hybrid models. A total of 7819 studies were initially identified, with 190 selected for detailed analysis based on inclusion criteria like Dice Similarity Coefficient (DSC) metrics and clinical applicability. Results: The analysis identified deep learning models, such as U-Net variants and Swin Transformer-based architectures, as leading methods for liver parenchyma and tumor segmentation, achieving DSC values up to 98.9% on benchmark datasets. For vessel segmentation, methods like DeepLabV3+ and the feature-based approaches demonstrated robustness across different datasets. Despite progress, challenges remain in segmenting structures like biliary ducts and hematomas due to limited annotated data and imaging variability. Discussion: While deep learning has significantly improved segmentation accuracy, challenges such as class imbalance and variability across imaging modalities persist. Hybrid approaches that combine traditional image processing with advanced neural networks show potential for further improvement. Future research should focus on enhancing generalizability through multi-modal data integration and exploring semi-supervised learning methods to overcome data scarcity. Conclusion: This comprehensive review highlights the advancements and ongoing challenges in liver segmentation, emphasizing the need for continuous innovation. By addressing current limitations, future methodologies can improve accuracy, efficiency, and clinical relevance, ultimately enhancing patient outcomes in hepatology.

30 December 2022 in Applied Sciences
Verified
Journal Article
Open access
PDF file
Petra SvobodováPetra Svobodová
Petra Svobodová
Khyati SethiaKhyati Sethia
Khyati Sethia
PSPetr Strakoš
Petr Strakoš
AKAlice Křesťanová
Alice Křesťanová
The segmentation of hepatic vessels is crucial for liver surgical planning. It is also a challenging task because of its small diameter. Hepatic vessels are often captured in images of low contrast and resolution. Our research uses filter enhancement to improve their contrast, which helps with their detection and final segmentation. We have designed a specific fusion of the Ranking Orientation Responses of Path Operators (RORPO) enhancement filter with a raw image, and we have compared it with the fusion of different enhancement filters based on Hessian eigenvectors. Additionally, we have evaluated the 3D U-Net and 3D V-Net neural networks as segmentation architectures, and have selected 3D V-Net as a better segmentation architecture in combination with the vessel enhancement technique. Furthermore, to tackle the pixel imbalance between the liver (background) and vessels (foreground), we have examined several variants of the Dice Loss functions, and have selected the Weighted Dice Loss for its performance. We have used public 3D Image Reconstruction for Comparison of Algorithm Database (3D-IRCADb) dataset, in which we have manually improved upon the annotations of vessels, since the dataset has poor-quality annotations for certain patients. The experiments demonstrate that our method achieves a mean dice score of 76.2%, which outperforms other state-of-the-art techniques.

2 July 2017
Verified
Conference Paper
Open access
PDF file
MJMilan Jaros
Milan Jaros
LRLubomir Riha
Lubomir Riha
TKTomas Karasek
Tomas Karasek
PSPetr Strakoš
Petr Strakoš
DKDaniel Krpelik
Daniel Krpelik

28 May 2025
Verified
Conference Paper
Open access
NSNitin Shukla
Nitin Shukla
ARAlessandro Romeo
Alessandro Romeo
CCCaterina Caravita
Caterina Caravita
LRLubomir Riha
Lubomir Riha
OVOndřej Vysocký
Ondřej Vysocký
STSebastian Trujillo-Gomez
Sebastian Trujillo-Gomez