Significance: Light-harvesting antenna are essential for photosynthetic systems, which comprise photosystems I and II (PSI and PSII, respectively). Phycobilisome (PBS) is a dominant and efficient antenna for PSII in cyanobacteria and some algae, whereas the attachment of PBS to PSI is a long-standing open question. We isolated a unique PBS–PSI supercomplex from a nitrogen-fixing cyanobacterium. Biochemical and spectral studies revealed that PBS is functionally connected to the PSI tetramer via a new universal connecting component. A pseudoatomic model explains the configuration of the PSI tetramer and how the PBS is connected to PSI. Such antenna may play an important role for light harvesting in PSI-driven cyclic electron transport to facilitate nitrogen fixation and other reactions.

The first ever cyanobacterial genome sequence was determined two decades ago and CyanoBase (http://genome.microbedb.jp/cyanobase), the first database for cyanobacteria was simultaneously developed to allow this genomic information to be used more efficiently. Since then, CyanoBase has constantly been extended and has received several updates. Here, we describe a new large-scale update of the database, which coincides with its 20th anniversary. We have expanded the number of cyanobacterial genomic sequences from 39 to 376 species, which consists of 86 complete and 290 draft genomes. We have also optimized the user interface for large genomic data to include the use of semantic web technologies and JBrowse and have extended community-based reannotation resources through the re-annotation of Synechocystis sp. PCC 6803 by the cyanobacterial research community. These updates have markedly improved CyanoBase, providing cyanobacterial genome annotations as references for cyanobacterial research.

The supercomplex organization of photosystem complexes was studied in various cyanobacteria, a glaucocystophyte and a primitive rhodophyte by blue-native PAGE with a wide range of detergent concentrations. In contrast to known cyanobacteria that produced the PSI trimer, a filamentous N₂-fixing cyanobacterium Anabaena sp. PCC 7120 and a glaucocystophyte Cyanophora paradoxa NIES 547 had a PSI tetramer and dimer but no trimer at all. This was confirmed by sucrose density gradient centrifugation. A primitive rhodophyte Cyanidioschyzon merolae had two species of PSI monomeric complex with a light-harvesting Chl complex of a different composition. These results are discussed with regard to the evolution of the PSI supercomplex.

It is widely believed that the photosystem II (PSII) complex may function as a dimer in the thylakoid membrane. Here, we report experimental conversion from the monomeric PSII to the dimeric form by treatment with high concentrations of n-dodecyl-β-d-maltopyranoside (DM). The content of the PSII monomer in a PsbTc deletion mutant was much higher than in the wild type when solubilized with low concentrations of DM. However, upon treatment with higher concentrations of DM, the PSII dimer was also recovered in the PsbTc deletion mutant. These results suggest that there are at least two distinct processes of dimerization: (i) PsbTc dependent and (ii) DM induced. We discuss the results with regard to the native assembly form(s) of PSII.