Black Amur bream (Megalobrama terminalis), a dominant species, resides in the Pearl River basin, known for its high plasticity in digestive ability. During spawning season, M. terminalis individuals with large body size and high fertility undergo a spawn migratory phase, while other smaller individuals prefer to settlement over migration. It is well known that gut microbial community often underpins the metabolic capability and regulates a wide variety of important functions in fish. However, little was known about how the gut microbiomes affect fish breeding migration. To investigate the variations in the gut microbiome of M. terminalis during the migration, we used high‐throughput 16S rRNA gene sequencing to reveal the distinct composition and diversity of the whole gut microbiome of migrated and nonmigrated population during period of peak reproduction, respectively. Our results indicated that nonmigrated population in estuary had a higher alpha diversity than that of migrated population in main stem. Additionally, an obvious abundant taxa shift between the gut microbiota community of nonmigrated and migrated M. terminalis was also observed. Change of dominant gut taxa from nonmigrated to migrated population was thought to be closely related to their degradation enzymes. Our results suggested that amino acid metabolism and lipid metabolism in migrated population were higher than that in nonmigrated population, providing a line of evidence for that M. terminalis change from partial herbivorous to partial carnivorous diet during breeding migration. We further concluded that, in order to digest foods of higher nutrition to supply energy to spawning migration, M. terminalis regulate activities of the gut microbiome and degradation enzymes, considered to be a key physiological strategy for reproduction.

Widespread introductions of non-native species, including aquaculture and ornamental species, threaten biodiversity and ecosystem functioning by modifying the trophic structure of communities. In this study, we quantified the multiple facets of trophic disruption in freshwater communities invaded by Nile tilapia, by comparing uninvaded and invaded rivers downstream of the Pearl River, China. Nile tilapia invasion reduced the trophic status of native fish species by forcing native herbivores and planktivores to seek new food sources. The food chain was also shortened by decreasing the trophic levels of native invertivores, omnivores, and piscivores, while the total isotopic niche area (TA) of native invertivores, omnivores, piscivores, and planktivores species also decreased. Simultaneously, Nile tilapia invasion affected the isotopic diversity of the fish community. Decreasing isotopic richness (IRic), isotopic evenness (IEve), and increasing isotopic uniqueness (IUni) indicated that Nile tilapia had a high trophic niche overlap with native species and competed with native species for food resources, and even caused the compression of the trophic niche of native species. Understanding the process described in this study is essential to conserve the stability of freshwater ecosystems, and improve the control strategy of alien aquatic organisms in south China.

Sinocyclocheilus brevifinus sp. nov. is described from a subterranean river at Maohedong Village, Guangxi Zhuang Autonomous Region, Southern China. The new species can be distinguished from all congeners in having functional eyes, last simple dorsal fin ray soft and without serrations along posterior margin, eye diameter small (3.4−5.0 %SL), tip of depressed dorsal fin not reaching vertical at anal fin origin, tip of depressed pelvic fin far from anus, maxillary barbel not reaching anterior edge of operculum, rostral barbel not reaching posterior edge of operculum, scales of lateral line row significantly larger than those of scale rows immediately above and below lateral line, and flanks with distinct black spots and blotches.

Geographical scale might be expected to impact significantly the efficiency of DNA barcoding as spatially comprehensive sampling provides opportunities to uncover intricate relationships among closely related species and to detect cryptic diversity for widespread taxa. Here, we present a DNA barcoding study on a Xencyprididae subfamily (Culterinae) involving the production of 998 newly generated DNA barcodes from East Asian drainages (80 localities). Together with 513 barcodes mined from BOLD and GenBank, a reference library consisting of 1511 DNA barcodes (116 localities) for 42 species was assembled, accounting for 66% of known Culterinae species. Intraspecific genetic distances are positively correlated to geographical scale, while a negative correlation is detected between interspecific genetic distances and geographical scale. The present study demonstrates that geographical scale influences the efficiency of DNA barcoding by narrowing the width of the barcoding gap. DNA‐based species delimitation analyses delimited 44 molecular operational taxonomic units (MOTUs). Rampant cryptic diversity is detected within eight species with multiple MOTUs, whereas 25 species present mismatch between morphological and molecular delimitations. A total of 18 species are lumped into nine MOTUs due to low interspecific divergence and/or mixed lineages. Several MOTU divergences are hypothesized to relate to known biogeographical barriers and geological events during the Pliocene and Pleistocene. This study provides new insights into the taxonomy and phylogeography of the subfamily Culterinae.

Teleost omnivorous fish that coexist partially sharing resources are likely to modify their gut traits and microbiome as a feedback mechanism between ecological processes and evolution. However, we do not understand how the core gut microbiome supports the metabolic capacity of the host and regulates digestive functions in specialized omnivorous fish gut traits. Therefore, we evaluated the gut microbiome of eight omnivorous fish from a single family (i.e., Cyprinidae) in the current study. We examined the correlation between host phylogeny, diet composition, and intestinal morphological traits related to the intestinal microbiome. The results indicated that cyprinid fish with similar relative gut lengths had considerable gut microbiome similarity. Notably, the SL (short relative gut length) group, as zoobenthos and zooplankton specialists, was abundant in Proteobacteria and was less abundant in Firmicutes than in the ML (medium relative gut length) and LL (long relative gut length) groups. These fish could extract nutrients from aquatic plants and algae. Additionally, we found the relative abundance of Clostridium and Romboutsia to be positively correlated with host relative gut length but negatively correlated with the relative abundance of Cetobacterium, Plesiomonas, Bacteroides, and Lactobacillus, and host-relative gut length. We also show a positive linear relationship between host gut microbiome carbohydrate metabolism and relative gut length, while the amino acid and lipid metabolism of the gut microbiome was negatively correlated with host-relative gut length. In addition, omnivorous species competing for resources improve their ecological adaptability through the specialization of gut length, which is closely related to variation in the synergy of the gut microbiome. Above all, specialized gut microbiota and associated gut morphologies enable fish to variably tolerate resource fluctuation and improve the utilization efficiency of nutrient extraction from challenging food resources.

A new species of bagrid catfish, Pseudobagrus gracilis, is described from specimens collected from the Zhujiang (Pearl River) basin, southern China. It closely resembles P. adiposalis Oshima and P. ussuriensis (Dybowski), but differs in having a large elliptical eye (19.8–24.4% HL), a short maxillary barbel not reaching the posterior margin of the eye, a lightly serrated posterior edge on the second dorsal spine, a caudal fin slightly emarginated with upper lobe slighter longer than lower lobe, frontal concave with a smooth surface, and supraoccipital process short (far from the first basal bone of the dorsal spine).