Daniel Sem

Dr. Daniel Sem

orcid

Research Focus & Metrics

Academic Career Length

37Years (1990-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 March 2002 in Nature Reviews Drug Discovery
Verified
Journal Article
Closed access
MPMaurizio Pellecchia
Maurizio Pellecchia
DSDaniel Sem
Daniel Sem
KWKurt Wüthrich
Kurt Wüthrich

1 May 2006 in Analytical Biochemistry
Verified
Journal Article
Closed access
PPPhani Kumar Pullela
Phani Kumar Pullela
TCTaurai Chiku
Taurai Chiku
Michael John CarvanMichael John Carvan
Michael John Carvan
DSDaniel Sem
Daniel Sem

1 February 2002 in Journal of Biomolecular NMR
Verified
Journal Article
Closed access
PDF file
MPMaurizio Pellecchia
Maurizio Pellecchia
DMDavid Meininger
David Meininger
QDQing Dong
Qing Dong
ECEdcon Chang
Edcon Chang
RJRick Jack
Rick Jack
DSDaniel Sem
Daniel Sem


1 February 1999 in Journal of Biological Chemistry
Verified
Journal Article
Open access
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ASAnna L. Shen
Anna L. Shen
DSDaniel Sem
Daniel Sem
CKCharles B. Kasper
Charles B. Kasper
Site-directed mutagenesis has been employed to study the mechanism of hydride transfer from NADPH to NADPH-cytochrome P450 oxidoreductase. Specifically, Ser457, Asp675, and Cys630 have been selected because of their proximity to the isoalloxazine ring of FAD. Substitution of Asp675 with asparagine or valine decreased cytochromec reductase activities 17- and 677-fold, respectively, while the C630A substitution decreased enzymatic activity 49-fold. Earlier studies had shown that the S457A mutation decreased cytochromec reductase activity 90-fold and also lowered the redox potential of the FAD semiquinone (Shen, A., and Kasper, C. B. (1996) Biochemistry 35, 9451–9459). The S457A/D675N and S457A/D675N/C630A mutants produced roughly multiplicative decreases in cytochrome c reductase activity (774- and 22000-fold, respectively) with corresponding decreases in the rates of flavin reduction. For each mutation, increases were observed in the magnitudes of the primary deuterium isotope effects with NADPD, consistent with decreased rates of hydride transfer from NADPH to FAD and an increase in the relative rate limitation of hydride transfer. Asp675substitutions lowered the redox potential of the FAD semiquinone. In addition, the C630A substitution shifted the pK a of an ionizable group previously identified as necessary for catalysis (Sem, D. S., and Kasper, C. B. (1993)Biochemistry 32, 11539–11547) from 6.9 to 7.8. These results are consistent with a model in which Ser457, Asp675, and Cys630 stabilize the transition state for hydride transfer. Ser457 and Asp675interact to stabilize both the transition state and the FAD semiquinone, while Cys630 interacts with the nicotinamide ring and the fully reduced FAD, functioning as a proton donor/acceptor to FAD.

1 August 1998 in Journal of Molecular Biology
Verified
Journal Article
Closed access
SHSigne M.A Holmbeck
Signe M.A Holmbeck
MFMark P Foster
Mark P Foster
DCDanilo R Casimiro
Danilo R Casimiro
DSDaniel Sem
Daniel Sem
HDH.JAne Dyson
H.JAne Dyson
PWPeter Wright
Peter Wright