David Fedida

Dr. David Fedida


Research Focus & Metrics

Academic Career Length

12Years (2015-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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23 January 2016 in eLife
Verified
Journal Article
Open access
CMChristopher I Murray
Christopher I Murray
MWMaartje Westhoff
Maartje Westhoff
JEJodene Eldstrom
Jodene Eldstrom
ETEmely Thompson
Emely Thompson
RERobert Emes
Robert Emes
DFDavid Fedida
David Fedida
Cardiac repolarization is determined in part by the slow delayed rectifier current (IKs), through the tetrameric voltage-gated ion channel, KCNQ1, and its β-subunit, KCNE1. The stoichiometry between α and β-subunits has been controversial with studies reporting either a strict 2 KCNE1:4 KCNQ1 or a variable ratio up to 4:4. We used IKs fusion proteins linking KCNE1 to one (EQ), two (EQQ) or four (EQQQQ) KCNQ1 subunits, to reproduce compulsory 4:4, 2:4 or 1:4 stoichiometries. Whole cell and single-channel recordings showed EQQ and EQQQQ to have increasingly hyperpolarized activation, reduced conductance, and shorter first latency of opening compared to EQ - all abolished by the addition of KCNE1. As well, using a UV-crosslinking unnatural amino acid in KCNE1, we found EQQQQ and EQQ crosslinking rates to be progressively slowed compared to KCNQ1, which demonstrates that no intrinsic mechanism limits the association of up to four β-subunits within the IKs complex.

29 June 2022 in Nature Communications
Verified
Journal Article
Open access
PDF file
KWKatrien Willegems
Katrien Willegems
JEJodene Eldstrom
Jodene Eldstrom
EKEfthimios Kyriakis
Efthimios Kyriakis
FAFariba Ataei
Fariba Ataei
HSHarutyun Sahakyan
Harutyun Sahakyan
DFDavid Fedida
David Fedida
The KCNQ1 ion channel plays critical physiological roles in electrical excitability and K+recycling in organs including the heart, brain, and gut. Loss of function is relatively common and can cause sudden arrhythmic death, sudden infant death, epilepsy and deafness. Here, we report cryogenic electron microscopic (cryo-EM) structures ofXenopusKCNQ1 bound to Ca2+/Calmodulin, with and without the KCNQ1 channel activator, ML277. A single binding site for ML277 was identified, localized to a pocket lined by the S4-S5 linker, S5 and S6 helices of two separate subunits. Several pocket residues are not conserved in other KCNQ isoforms, explaining specificity. MD simulations and point mutations support this binding location for ML277 in open and closed channels and reveal that prevention of inactivation is an important component of the activator effect. Our work provides direction for therapeutic intervention targeting KCNQ1 loss of function pathologies including long QT interval syndrome and seizures.

Verified
Journal Article
Open access
PDF file
MPMarc Pourrier
Marc Pourrier
DFDavid Fedida
David Fedida
There is a need for improved in vitro models of inherited cardiac diseases to better understand basic cellular and molecular mechanisms and advance drug development. Most of these diseases are associated with arrhythmias, as a result of mutations in ion channel or ion channel-modulatory proteins. Thus far, the electrophysiological phenotype of these mutations has been typically studied using transgenic animal models and heterologous expression systems. Although they have played a major role in advancing the understanding of the pathophysiology of arrhythmogenesis, more physiological and predictive preclinical models are necessary to optimize the treatment strategy for individual patients. Human induced pluripotent stem cell-derived cardiomyocytes (hiPSC-CMs) have generated much interest as an alternative tool to model arrhythmogenic diseases. They provide a unique opportunity to recapitulate the native-like environment required for mutated proteins to reproduce the human cellular disease phenotype. However, it is also important to recognize the limitations of this technology, specifically their fetal electrophysiological phenotype, which differentiates them from adult human myocytes. In this review, we provide an overview of the major inherited arrhythmogenic cardiac diseases modeled using hiPSC-CMs and for which the cellular disease phenotype has been somewhat characterized.

4 June 2020 in Frontiers in Physiology
Verified
Journal Article
Open access
PDF file
YWYundi Wang
Yundi Wang
JEJodene Eldstrom
Jodene Eldstrom
DFDavid Fedida
David Fedida
The IKs channel complex is formed by the co-assembly of Kv7.1 (KCNQ1), a voltage-gated potassium channel, with its β-subunit, KCNE1 and the association of numerous accessory regulatory molecules such as PIP2, calmodulin, and yotiao. As a result, the IKs potassium current shows kinetic and regulatory flexibility, which not only allows IKs to fulfill physiological roles as disparate as cardiac repolarization and the maintenance of endolymph K+ homeostasis, but also to cause significant disease when it malfunctions. Here, we review new areas of understanding in the assembly, kinetics of activation and inactivation, voltage-sensor pore coupling, unitary events and regulation of this important ion channel complex, all of which have been given further impetus by the recent solution of cryo-EM structural representations of KCNQ1 alone and KCNQ1+KCNE3. Recently, the stoichiometric ratio of KCNE1 to KCNQ1 subunits has been confirmed to be variable up to a ratio of 4:4, rather than fixed at 2:4, and we will review the results and new methodologies that support this conclusion. Significant advances have been made in understanding differences between KCNQ1 and IKs gating using voltage clamp fluorimetry and mutational analysis to illuminate voltage sensor activation and inactivation, and the relationship between voltage sensor translation and pore domain opening. We now understand that the KCNQ1 pore can open with different permeabilities and conductance when the voltage sensor is in partially or fully activated positions, and the ability to make robust single channel recordings from IKs channels has also revealed the complicated pore subconductance architecture during these opening steps, during inactivation, and regulation by 1−4 associated KCNE1 subunits. Experiments placing mutations into individual voltage sensors to drastically change voltage dependence or prevent their movement altogether have demonstrated that the activation of KCNQ1 alone and IKs can best be explained using allosteric models of channel gating. Finally, we discuss how the intrinsic gating properties of KCNQ1 and IKs are highly modulated through the impact of intracellular signaling molecules and co-factors such as PIP2, protein kinase A, calmodulin and ATP, all of which modulate IKs current kinetics and contribute to diverse IKs channel complex function.

27 March 2019 in Proceedings of the National Academy of Sciences
Verified
Journal Article
Open access
PDF file
MWMaartje Westhoff
Maartje Westhoff
JEJodene Eldstrom
Jodene Eldstrom
CMChristopher I. Murray
Christopher I. Murray
ETEmely Thompson
Emely Thompson
DFDavid Fedida
David Fedida
Significance: A potassium current in the heart ( I Ks ) is important in regulating the heartbeat. These channels, composed of KCNQ1 and KCNE1 subunits, have four voltage-sensitive components and a pore component, which opens to allow current to pass through. The number of voltage-sensitive components required to activate to allow the pore to open has been debated extensively. While some believe all four are needed, others believe the pore can open with movement of a single voltage-sensitive component. Here, we show that the latter idea is correct, with movement of each component resulting in increasingly more current. This makes for a uniquely flexible channel, tunable for a broad range of responses.

1 March 2015 in Biophysical Journal
Verified
Journal Article
Closed access
SGSamuel J. Goodchild
Samuel J. Goodchild
LMLogan C. Macdonald
Logan C. Macdonald
DFDavid Fedida
David Fedida