Mannudeep K. Kalra

Dr. Mannudeep K. Kalra

Department of Radiology, Massachusetts General Hospital, Harvard Medical School, Boston, MA 02114, USA

Research Focus & Metrics

Academic Career Length

19Years (2008-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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13 June 2017 in IEEE Transactions on Medical Imaging
Verified
Journal Article
Closed access
hu chenhu chen
hu chen
YZYi Zhang
Yi Zhang
MKMannudeep K. Kalra
Mannudeep K. Kalra
FLFeng Lin
Feng Lin
YCYang Chen
Yang Chen
Ge WangGe Wang
Ge Wang
Given the potential risk of X-ray radiation to the patient, low-dose CT has attracted a considerable interest in the medical imaging field. Currently, the main stream low-dose CT methods include vendor-specific sinogram domain filtration and iterative reconstruction algorithms, but they need to access raw data, whose formats are not transparent to most users. Due to the difficulty of modeling the statistical characteristics in the image domain, the existing methods for directly processing reconstructed images cannot eliminate image noise very well while keeping structural details. Inspired by the idea of deep learning, here we combine the autoencoder, deconvolution network, and shortcut connections into the residual encoder-decoder convolutional neural network (RED-CNN) for low-dose CT imaging. After patch-based training, the proposed RED-CNN achieves a competitive performance relative to the-state-of-art methods in both simulated and clinical cases. Especially, our method has been favorably evaluated in terms of noise suppression, structural preservation, and lesion detection.

17 April 2018 in IEEE Transactions on Medical Imaging
Verified
Journal Article
Closed access
QYQingsong Yang
Qingsong Yang
PYPingkun Yan
Pingkun Yan
YZYanbo Zhang
Yanbo Zhang
HYHengyong Yu
Hengyong Yu
YSYongyi Shi
Yongyi Shi
Ge WangGe Wang
Ge Wang
The continuous development and extensive use of computed tomography (CT) in medical practice has raised a public concern over the associated radiation dose to the patient. Reducing the radiation dose may lead to increased noise and artifacts, which can adversely affect the radiologists' judgment and confidence. Hence, advanced image reconstruction from low-dose CT data is needed to improve the diagnostic performance, which is a challenging problem due to its ill-posed nature. Over the past years, various low-dose CT methods have produced impressive results. However, most of the algorithms developed for this application, including the recently popularized deep learning techniques, aim for minimizing the mean-squared error (MSE) between a denoised CT image and the ground truth under generic penalties. Although the peak signal-to-noise ratio is improved, MSE- or weighted-MSE-based methods can compromise the visibility of important structural details after aggressive denoising. This paper introduces a new CT image denoising method based on the generative adversarial network (GAN) with Wasserstein distance and perceptual similarity. The Wasserstein distance is a key concept of the optimal transport theory and promises to improve the performance of GAN. The perceptual loss suppresses noise by comparing the perceptual features of a denoised output against those of the ground truth in an established feature space, while the GAN focuses more on migrating the data noise distribution from strong to weak statistically. Therefore, our proposed method transfers our knowledge of visual perception to the image denoising task and is capable of not only reducing the image noise level but also trying to keep the critical information at the same time. Promising results have been obtained in our experiments with clinical CT images.

2 May 2018 in IEEE Transactions on Medical Imaging
Verified
Journal Article
Closed access
HSHongming Shan
Hongming Shan
YZYi Zhang
Yi Zhang
QYQingsong Yang
Qingsong Yang
UKUwe Kruger
Uwe Kruger
MKMannudeep K. Kalra
Mannudeep K. Kalra
Ge WangGe Wang
Ge Wang
Low-dose computed tomography (LDCT) has attracted major attention in the medical imaging field, since CT-associated X-ray radiation carries health risks for patients. The reduction of the CT radiation dose, however, compromises the signal-to-noise ratio, which affects image quality and diagnostic performance. Recently, deep-learning-based algorithms have achieved promising results in LDCT denoising, especially convolutional neural network (CNN) and generative adversarial network (GAN) architectures. This paper introduces a conveying path-based convolutional encoder-decoder (CPCE) network in 2-D and 3-D configurations within the GAN framework for LDCT denoising. A novel feature of this approach is that an initial 3-D CPCE denoising model can be directly obtained by extending a trained 2-D CNN, which is then fine-tuned to incorporate 3-D spatial information from adjacent slices. Based on the transfer learning from 2-D to 3-D, the 3-D network converges faster and achieves a better denoising performance when compared with a training from scratch. By comparing the CPCE network with recently published work based on the simulated Mayo data set and the real MGH data set, we demonstrate that the 3-D CPCE denoising model has a better performance in that it suppresses image noise and preserves subtle structures.

10 June 2019 in Nature Machine Intelligence
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Journal Article
Closed access
PDF file
HSHongming Shan
Hongming Shan
APAtul Padole
Atul Padole
FHFatemeh Homayounieh
Fatemeh Homayounieh
UKUwe Kruger
Uwe Kruger
RKRuhani Doda Khera
Ruhani Doda Khera
Ge WangGe Wang
Ge Wang

9 December 2022 in Healthcare
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Journal Article
Open access
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NKNarendra N. Khanna
Narendra N. Khanna
Mahesh A MaindarkarMahesh A Maindarkar
Mahesh A Maindarkar
VVVijay Viswanathan
Vijay Viswanathan
JFJosé Manuel Mattos Fernandes e Fernandes
José Manuel Mattos Fernandes e Fernandes
SPSudip Paul
Sudip Paul
JSJasjit S. Suri
Jasjit S. Suri
Motivation: The price of medical treatment continues to rise due to (i) an increasing population; (ii) an aging human growth; (iii) disease prevalence; (iv) a rise in the frequency of patients that utilize health care services; and (v) increase in the price. Objective: Artificial Intelligence (AI) is already well-known for its superiority in various healthcare applications, including the segmentation of lesions in images, speech recognition, smartphone personal assistants, navigation, ride-sharing apps, and many more. Our study is based on two hypotheses: (i) AI offers more economic solutions compared to conventional methods; (ii) AI treatment offers stronger economics compared to AI diagnosis. This novel study aims to evaluate AI technology in the context of healthcare costs, namely in the areas of diagnosis and treatment, and then compare it to the traditional or non-AI-based approaches. Methodology: PRISMA was used to select the best 200 studies for AI in healthcare with a primary focus on cost reduction, especially towards diagnosis and treatment. We defined the diagnosis and treatment architectures, investigated their characteristics, and categorized the roles that AI plays in the diagnostic and therapeutic paradigms. We experimented with various combinations of different assumptions by integrating AI and then comparing it against conventional costs. Lastly, we dwell on three powerful future concepts of AI, namely, pruning, bias, explainability, and regulatory approvals of AI systems. Conclusions: The model shows tremendous cost savings using AI tools in diagnosis and treatment. The economics of AI can be improved by incorporating pruning, reduction in AI bias, explainability, and regulatory approvals.

31 August 2022 in JAMA Network Open
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Journal Article
Open access
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JAJong Seok Ahn
Jong Seok Ahn
SEShadi Ebrahimian
Shadi Ebrahimian
SMShaunagh McDermott
Shaunagh McDermott
SLSanghyup Lee
Sanghyup Lee
LNLaura Naccarato
Laura Naccarato
MKMannudeep K. Kalra
Mannudeep K. Kalra
Chest radiography is the most common imaging modality in the world for its portability, low cost, and accessibility.1,2 It provides valuable information in detecting thoracic diseases and aiding with clinical decisions in managing them. Despite the abundance of test numbers, chest radiograph interpretation and reporting is an inherently difficult and subjective task, with previous research showing low to moderate interreader agreement in the final radiology report.3-9 Furthermore, timely reporting of chest radiographs has been an issue in both developing and developed countries because of the shortage of qualified readers.10,11 Accurate and efficient reading of chest radiographs is an important clinical target, especially in detecting clinically critical or urgent findings such as pneumothorax.12