Saroj Kumar Das

Dr. Saroj Kumar Das


Research Focus & Metrics

Academic Career Length

12Years (2015-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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27 July 2020 in EMBO Reports
Verified
Journal Article
Open access
PDF file
KJKautilya Kumar Jena
Kautilya Kumar Jena
SMSubhash Mehto
Subhash Mehto
PNParej Nath
Parej Nath
NCNishant Ranjan Chauhan
Nishant Ranjan Chauhan
RSRinku Sahu
Rinku Sahu
SCSantosh Chauhan
Santosh Chauhan
Activation of the type 1 interferon response is extensively connected to the pathogenesis of autoimmune diseases. Loss of function of Immunity Related GTPase M (IRGM) has also been associated to several autoimmune diseases, but its mechanism of action is unknown. Here, we found that IRGM is a master negative regulator of the interferon response. Several nucleic acid‐sensing pathways leading to interferon‐stimulated gene expression are highly activated in IRGM knockout mice and human cells. Mechanistically, we show that IRGM interacts with nucleic acid sensor proteins, including cGAS and RIG‐I, and mediates their p62‐dependent autophagic degradation to restrain interferon signaling. Further, IRGM deficiency results in defective mitophagy leading to the accumulation of defunct leaky mitochondria that release cytosolic DAMPs and mtROS. Hence, IRGM deficiency increases not only the levels of the sensors, but also those of the stimuli that trigger the activation of the cGAS‐STING and RIG‐I‐MAVS signaling axes, leading to robust induction of IFN responses. Taken together, this study defines the molecular mechanisms by which IRGM maintains interferon homeostasis and protects from autoimmune diseases.

20 June 2019 in Autophagy
Verified
Journal Article
Closed access
SMSubhash Mehto
Subhash Mehto
SCSwati Chauhan
Swati Chauhan
KJKautilya Kumar Jena
Kautilya Kumar Jena
NCNishant Ranjan Chauhan
Nishant Ranjan Chauhan
PNParej Nath
Parej Nath
SCSantosh Chauhan
Santosh Chauhan
IRGM is an established genetic risk factor for Crohn disease (CD) and several other inflammatory disorders. However, the mechanisms employed by IRGM to restrain the inflammation are not known. In our recent study, we showed that IRGM negatively regulates NLRP3 inflammasome activation. IRGM employs 2 parallel approaches to constrain inflammasome activation. First, IRGM directly interacts with NLRP3 and PYCARD/ASC, and mediates their SQSTM1/p62-dependent macroautophagic/autophagic degradation. Second, IRGM impedes inflammasome assembly by blocking the polymerization of NLRP3 and PYCARD. We also found that IRGM suppresses NLRP3-mediated exacerbated outcomes of dextran sodium sulfate (DSS)-induced colitis in a mouse model. Taken together, this study presents evidence that IRGM can directly regulate inflammation and protect from inflammatory diseases.

15 January 2021 in Cancer Research
Verified
Journal Article
Open access
PDF file
SKSrinivasa P. Kolapalli
Srinivasa P. Kolapalli
RSRinku Sahu
Rinku Sahu
NCNishant R. Chauhan
Nishant R. Chauhan
KJKautilya K. Jena
Kautilya K. Jena
SMSubhash Mehto
Subhash Mehto
SCSwati Chauhan
Swati Chauhan
DZIP3/hRUL138 is a poorly characterized RNA-binding RING E3-ubiquitin ligase with functions in embryonic development. Here we demonstrate that DZIP3 is a crucial driver of cancer cell growth, migration, and invasion. In mice and zebrafish cancer models, DZIP3 promoted tumor growth and metastasis. In line with these results, DZIP3 was frequently overexpressed in several cancer types. Depletion of DZIP3 from cells resulted in reduced expression of Cyclin D1 and a subsequent G1 arrest and defect in cell growth. Mechanistically, DZIP3 utilized its two different domains to interact and stabilize Cyclin D1 both at mRNA and protein levels. Using an RNA-binding lysine-rich region, DZIP3 interacted with the AU-rich region in 3′ untranslated region of Cyclin D1 mRNA and stabilized it. Using a RING E3-ligase domain, DZIP3 interacted and increased K63-linked ubiquitination of Cyclin D1 protein to stabilize it. Remarkably, DZIP3 interacted with, ubiquitinated, and stabilized Cyclin D1 predominantly in the G1 phase of the cell cycle, where it is needed for cell-cycle progression. In agreement with this, a strong positive correlation of mRNA expression between DZIP3 and Cyclin D1 in different cancer types was observed. Additionally, DZIP3 regulated several cell cycle proteins by modulating the Cyclin D1–E2F axes. Taken together, this study demonstrates for the first time that DZIP3 uses a unique two-pronged mechanism in its stabilization of Cyclin D1 to drive cell-cycle and cancer progression. Significance: These findings show that DZIP3 is a novel driver of cell-cycle and cancer progression via its control of Cyclin D1 mRNA and protein stability in a cell-cycle phase-dependent manner.

27 August 2015 in Journal of Neurochemistry
Verified
Journal Article
Open access
PDF file
KBKalpana Kumari Barhwal
Kalpana Kumari Barhwal
SDSaroj Kumar Das
Saroj Kumar Das
AKAshish Kumar
Ashish Kumar
SHSunil K. Hota
Sunil K. Hota
RSRavi B. Srivastava
Ravi B. Srivastava
Hypoxia has been reported to cause hippocampal neurodegeneration resulting in learning and memory deficits. In the present study, we investigated the potential of salidroside, a glucoside derivative of tyrosol, in ameliorating hypoxia‐induced neurodegeneration and memory impairment. Morris water maze test showed improvement in learning and spatial memory of salidroside‐treated hypoxic rats correlating with increased dendritic intersections and arborization. Salidroside administration increased phosphorylation of insulin receptor subunit A (IRA) at Y972, Y1162/63, and Y1146 sites and subsequent activation of AMP‐activated protein kinase (AMPK) α subunit isoforms pAMPKα1 and pAMPKα2 resulting in mitochondrial biogenesis. Contrarily, silencing of IRA in salidroside‐supplemented hypoxic hippocampal cells could not improve cell viability or alter pAMPKα1 and pAMPKα2 expression. Rats administered with salidroside showed elevated expression of phosphorylated cAMP response element‐binding protein in the hippocampus. Salidroside administration also resulted in increased sirtuin 1 (SIRT1) activity through a cytochrome P4502E1 (CYP2E1)‐regulated mechanism that was independent of pIRA. Taken together, these findings suggest a synergistic role of pIRA and SIRT1 in salidroside‐mediated neuroprotection, mitochondrial biogenesis, and cognitive improvement during hypoxia. image We propose a novel mechanism for salidroside‐mediated neuroprotection in hypoxia. Salidroside phosphorylates and activates Insulin Receptor A subunit which in turn leads to phosphorylation of Akt and ERK and subsequent activation of AMPK (AMP‐activated protein kinase). Salidroside also increases Sirt1 activity which along with pAMPK mediates mitochondrial biogenesis.

1 November 2020 in Environmental Toxicology and Pharmacology
Verified
Journal Article
Closed access
PSPradyumna Kumar Sahoo
Pradyumna Kumar Sahoo
LPLilesh Kumar Pradhan
Lilesh Kumar Pradhan
SASai Aparna
Sai Aparna
KAKomal Agarwal
Komal Agarwal
ABAnkita Banerjee
Ankita Banerjee
SDSaroj Kumar Das
Saroj Kumar Das

3 August 2021 in Journal of Biochemical and Molecular Toxicology
Verified
Journal Article
Closed access
PDF file
PSPradyumna K. Sahoo
Pradyumna K. Sahoo
SASai Aparna
Sai Aparna
PNPradeep K. Naik
Pradeep K. Naik
SSShashi B. Singh
Shashi B. Singh
SDSaroj Kumar Das
Saroj Kumar Das