Joost Van Dongen

Dr. Joost Van Dongen


Research Focus & Metrics

Academic Career Length

27Years (2000-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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23 October 2011 in Nature
Verified
Journal Article
Closed access
FLFrancesco Licausi
Francesco Licausi
MKMonika Kosmacz
Monika Kosmacz
Daan WeitsDaan Weits
Daan Weits
BGBeatrice Giuntoli
Beatrice Giuntoli
Federico Manuel GiorgiFederico Manuel Giorgi
Federico Manuel Giorgi
JDJoost Van Dongen
Joost Van Dongen

1 March 2012 in Trends in Plant Science
Verified
Journal Article
Closed access
JBJulia Bailey-Serres
Julia Bailey-Serres
TFTakeshi Fukao
Takeshi Fukao
DGDaniel J. Gibbs
Daniel J. Gibbs
MHMichael J. Holdsworth
Michael J. Holdsworth
SLSeung Cho Lee
Seung Cho Lee
JDJoost Van Dongen
Joost Van Dongen

20 August 2015 in Biological Reviews
Verified
Journal Article
Open access
PDF file
MHMonika Hilker
Monika Hilker
JSJens Schwachtje
Jens Schwachtje
MBMargarete Baier
Margarete Baier
SBSalma Balazadeh
Salma Balazadeh
IBIsabel Bäurle
Isabel Bäurle
JKJoachim Kopka
Joachim Kopka
Experience and memory of environmental stimuli that indicate future stress can prepare (prime) organismic stress responses even in species lacking a nervous system. The process through which such organisms prepare their phenotype for an improved response to future stress has been termed ‘priming’. However, other terms are also used for this phenomenon, especially when considering priming in different types of organisms and when referring to different stressors. Here we propose a conceptual framework for priming of stress responses in bacteria, fungi and plants which allows comparison of priming with other terms, e.g. adaptation, acclimation, induction, acquired resistance and cross protection. We address spatial and temporal aspects of priming and highlight current knowledge about the mechanisms necessary for information storage which range from epigenetic marks to the accumulation of (dormant) signalling molecules. Furthermore, we outline possible patterns of primed stress responses. Finally, we link the ability of organisms to become primed for stress responses (their ‘primability’) with evolutionary ecology aspects and discuss which properties of an organism and its environment may favour the evolution of priming of stress responses.

1 March 2011 in Trends in Plant Science
Verified
Journal Article
Closed access
JGJagadis Kapuganti Gupta
Jagadis Kapuganti Gupta
AFAlisdair R. Fernie
Alisdair R. Fernie
WKWerner M. Kaiser
Werner M. Kaiser
JDJoost Van Dongen
Joost Van Dongen

18 March 2008 in Journal of The Royal Society Interface
Verified
Journal Article
Open access
MRMonika Rumpler
Monika Rumpler
AWAlexander Woesz
Alexander Woesz
JDJohn W.C Dunlop
John W.C Dunlop
JDJoost Van Dongen
Joost Van Dongen
Peter FratzlPeter Fratzl
Peter Fratzl
Tissue formation is determined by uncountable biochemical signals between cells; in addition, physical parameters have been shown to exhibit significant effects on the level of the single cell. Beyond the cell, however, there is still no quantitative understanding of how geometry affects tissue growth, which is of much significance for bone healing and tissue engineering. In this paper, it is shown that the local growth rate of tissue formed by osteoblasts is strongly influenced by the geometrical features of channels in an artificial three-dimensional matrix. Curvature-driven effects and mechanical forces within the tissue may explain the growth patterns as demonstrated by numerical simulation and confocal laser scanning microscopy. This implies that cells within the tissue surface are able to sense and react to radii of curvature much larger than the size of the cells themselves. This has important implications towards the understanding of bone remodelling and defect healing as well as towards scaffold design in bone tissue engineering.

22 January 2010 in The Plant Journal
Verified
Journal Article
Open access
PDF file
FLFrancesco Licausi
Francesco Licausi
JDJoost Van Dongen
Joost Van Dongen
BGBeatrice Giuntoli
Beatrice Giuntoli
GNGiacomo Novi
Giacomo Novi
ASAntonietta Santaniello
Antonietta Santaniello
PPPierdomenico Perata
Pierdomenico Perata
Plants often experience challenging hypoxic conditions imposed by soil waterlogging or complete flooding. In rice, Sub1A, a flooding-induced ethylene responsive factor (ERF) plays a crucial role in submergence tolerance. In this study, we examined two Arabidopsis Hypoxia Responsive ERF genes (HRE1 and HRE2), belonging to the same ERF group as Sub1A. Transgenic Arabidopsis plants, which over-expressed HRE1, showed an improved tolerance of anoxia, whereas a double-knockout mutant hre1hre2 was more susceptible than the wild type. HRE1 over-expressing plants showed an increased activity in the fermentative enzymes pyruvate decarboxylase and alcohol dehydrogenase together with increased ethanol production under hypoxia, but not in normoxia. Whole-genome microarray analyses suggested that an over-expression of HRE1, but not HRE2, increased the induction of most anaerobic genes under hypoxia. Real-time quantitative (q)PCR analyses confirmed a positive effect of HRE1 over-expression on several anaerobic genes, whereas the double-knockout mutant hre1hre2 showed a decreased expression in the same genes after 4 h of hypoxia. Single-knockout mutants did not show significant differences from the wild type. We found that the regulation of HRE1 and HRE2 by low oxygen relies on different mechanisms, since HRE1 requires protein synthesis to be induced while HRE2 does not. HRE2 is likely to be regulated post-transcriptionally by mRNA stabilization. We propose that HRE1 and HRE2 play a partially redundant role in low oxygen signalling in Arabidopsis thaliana, thus improving the tolerance of the plant to the stress by enhancing anaerobic gene expression and ethanolic fermentation.