Pedro Domingos

Dr. Pedro Domingos


Research Focus & Metrics

Academic Career Length

26Years (2001-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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27 January 2006 in Machine Learning
Verified
Journal Article
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MRMatthew Richardson
Matthew Richardson
PDPedro Domingos
Pedro Domingos

10 April 2009 in Apoptosis
Verified
Journal Article
Closed access
PDF file
VRVanya I. Rasheva
Vanya I. Rasheva
PDPedro Domingos
Pedro Domingos

14 December 2006 in The EMBO Journal
Verified
Journal Article
Open access
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HRHyung Don Ryoo
Hyung Don Ryoo
PDPedro Domingos
Pedro Domingos
MKMin‐Ji Kang
Min‐Ji Kang
HSHermann Steller
Hermann Steller
Stress in the endoplasmic reticulum (ER stress) and its cellular response, the unfolded protein response (UPR), are implicated in a wide variety of diseases, but its significance in many disorders remains to be validated in vivo . Here, we analyzed a branch of the UPR mediated by xbp1 in Drosophila to establish its role in neurodegenerative diseases. The Drosophila xbp1 mRNA undergoes ire‐1 ‐mediated unconventional splicing in response to ER stress, and this property was used to develop a specific UPR marker, xbp1‐EGFP, in which EGFP is expressed in frame only after ER stress. xbp1‐EGFP responds specifically to ER stress, but not to proteins that form cytoplasmic aggregates. The ire‐1/xbp1 pathway regulates heat shock cognate protein 3 ( hsc3 ), an ER chaperone. xbp1 splicing and hsc3 induction occur in the retina of ninaE G69D −/+, a Drosophila model for autosomal dominant retinitis pigmentosa (ADRP), and reduction of xbp1 gene dosage accelerates retinal degeneration of these animals. These results demonstrate the role of the UPR in the Drosophila ADRP model and open new opportunities for examining the UPR in other Drosophila disease models.

15 September 2003 in Development
Verified
Journal Article
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NINobue Itasaki
Nobue Itasaki
CJC. Michael Jones
C. Michael Jones
SMSara Mercurio
Sara Mercurio
ARAlison Rowe
Alison Rowe
PDPedro Domingos
Pedro Domingos
Robb KrumlaufRobb Krumlauf
Robb Krumlauf
We have isolated a novel secreted molecule, Wise, by a functional screen for activities that alter the anteroposterior character of neuralised Xenopus animal caps. Wise encodes a secreted protein capable of inducing posterior neural markers at a distance. Phenotypes arising from ectopic expression or depletion of Wise resemble those obtained when Wnt signalling is altered. In animal cap assays, posterior neural markers can be induced by Wnt family members, and induction of these markers by Wise requires components of the canonical Wnt pathway. This indicates that in this context Wise activates the Wnt signalling cascade by mimicking some of the effects of Wnt ligands. Activation of the pathway was further confirmed by nuclear accumulation of β-catenin driven by Wise. By contrast, in an assay for secondary axis induction, extracellularly Wise antagonises the axis-inducing ability of Wnt8. Thus, Wise can activate or inhibit Wnt signalling in a context-dependent manner. The Wise protein physically interacts with the Wnt co-receptor, lipoprotein receptor-related protein 6 (LRP6), and is able to compete with Wnt8 for binding to LRP6. These activities of Wise provide a new mechanism for integrating inputs through the Wnt coreceptor complex to modulate the balance of Wnt signalling.

1 November 2003 in The VLDB Journal
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Journal Article
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ADAnHai Doan
AnHai Doan
JMJayant Madhavan
Jayant Madhavan
RDRobin Dhamankar
Robin Dhamankar
PDPedro Domingos
Pedro Domingos
AHAlon Halevy
Alon Halevy

1 October 2017 in Cell Reports
Verified
Journal Article
Open access
MCMiguel Cavadas
Miguel Cavadas
IOIoanna Oikonomidi
Ioanna Oikonomidi
CGCatarina J. Gaspar
Catarina J. Gaspar
EBEmma Burbridge
Emma Burbridge
MBMarina Badenes
Marina Badenes
Colin AdrainColin Adrain
Colin Adrain
Cell surface metalloproteases coordinate signaling during development, tissue homeostasis, and disease. TACE (TNF-α-converting enzyme), is responsible for cleavage ("shedding") of membrane-tethered signaling molecules, including the cytokine TNF, and activating ligands of the EGFR. The trafficking of TACE within the secretory pathway requires its binding to iRhom2, which mediates the exit of TACE from the endoplasmic reticulum. An important, but mechanistically unclear, feature of TACE biology is its ability to be stimulated rapidly on the cell surface by numerous inflammatory and growth-promoting agents. Here, we report a role for iRhom2 in TACE stimulation on the cell surface. TACE shedding stimuli trigger MAP kinase-dependent phosphorylation of iRhom2 N-terminal cytoplasmic tail. This recruits 14-3-3 proteins, enforcing the dissociation of TACE from complexes with iRhom2, promoting the cleavage of TACE substrates. Our data reveal that iRhom2 controls multiple aspects of TACE biology, including stimulated shedding on the cell surface.