Xiabi Liu

Prof. Xiabi Liu


Research Focus & Metrics

Academic Career Length

21Years (2006-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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16 March 2021 in Diagnostics
Verified
Journal Article
Open access
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XLXiabi Liu
Xiabi Liu
YWYuchai Wan
Yuchai Wan
ZZZhongshu Zheng
Zhongshu Zheng
Chokri FERKOUSChokri FERKOUS
Chokri FERKOUS
DBDalal Bardou
Dalal Bardou
Breast cancer is a serious threat to women. Many machine learning-based computer-aided diagnosis (CAD) methods have been proposed for the early diagnosis of breast cancer based on histopathological images. Even though many such classification methods achieved high accuracy, many of them lack the explanation of the classification process. In this paper, we compare the performance of conventional machine learning (CML) against deep learning (DL)-based methods. We also provide a visual interpretation for the task of classifying breast cancer in histopathological images. For CML-based methods, we extract a set of handcrafted features using three feature extractors and fuse them to get image representation that would act as an input to train five classical classifiers. For DL-based methods, we adopt the transfer learning approach to the well-known VGG-19 deep learning architecture, where its pre-trained version on the large scale ImageNet, is block-wise fine-tuned on histopathological images. The evaluation of the proposed methods is carried out on the publicly available BreaKHis dataset for the magnification dependent classification of benign and malignant breast cancer and their eight sub-classes, and a further validation on KIMIA Path960, a magnification-free histopathological dataset with 20 image classes, is also performed. After providing the classification results of CML and DL methods, and to better explain the difference in the classification performance, we visualize the learned features. For the DL-based method, we intuitively visualize the areas of interest of the best fine-tuned deep neural networks using attention maps to explain the decision-making process and improve the clinical interpretability of the proposed models. The visual explanation can inherently improve the pathologist’s trust in automated DL methods as a credible and trustworthy support tool for breast cancer diagnosis. The achieved results show that DL methods outperform CML approaches where we reached an accuracy between 94.05% and 98.13% for the binary classification and between 76.77% and 88.95% for the eight-class classification, while for DL approaches, the accuracies range from 85.65% to 89.32% for the binary classification and from 63.55% to 69.69% for the eight-class classification.

1 January 2020 in BioMed Research International
Verified
Journal Article
Open access
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said boumarafsaid boumaraf
said boumaraf
XLXiabi Liu
Xiabi Liu
Chokri FERKOUSChokri FERKOUS
Chokri FERKOUS
XMXiaohong Ma
Xiaohong Ma
Mammography remains the most prevalent imaging tool for early breast cancer screening. The language used to describe abnormalities in mammographic reports is based on the Breast Imaging Reporting and Data System (BI‐RADS). Assigning a correct BI‐RADS category to each examined mammogram is a strenuous and challenging task for even experts. This paper proposes a new and effective computer‐aided diagnosis (CAD) system to classify mammographic masses into four assessment categories in BI‐RADS. The mass regions are first enhanced by means of histogram equalization and then semiautomatically segmented based on the region growing technique. A total of 130 handcrafted BI‐RADS features are then extracted from the shape, margin, and density of each mass, together with the mass size and the patient’s age, as mentioned in BI‐RADS mammography. Then, a modified feature selection method based on the genetic algorithm (GA) is proposed to select the most clinically significant BI‐RADS features. Finally, a back‐propagation neural network (BPN) is employed for classification, and its accuracy is used as the fitness in GA. A set of 500 mammogram images from the digital database for screening mammography (DDSM) is used for evaluation. Our system achieves classification accuracy, positive predictive value, negative predictive value, and Matthews correlation coefficient of 84.5%, 84.4%, 94.8%, and 79.3%, respectively. To our best knowledge, this is the best current result for BI‐RADS classification of breast masses in mammography, which makes the proposed system promising to support radiologists for deciding proper patient management based on the automatically assigned BI‐RADS categories.

1 February 2017 in Journal of Biomedical Informatics
Verified
Journal Article
Closed access
LMLing Ma
Ling Ma
XLXiabi Liu
Xiabi Liu
YGYan Gao
Yan Gao
YZYanfeng Zhao
Yanfeng Zhao
XZXinming Zhao
Xinming Zhao
CZChunwu Zhou
Chunwu Zhou

20 January 2021 in IEEE Journal of Biomedical and Health Informatics
Verified
Journal Article
Closed access
WLWeihua Liu
Weihua Liu
XLXiabi Liu
Xiabi Liu
HLHuiyu Li
Huiyu Li
MLMincan Li
Mincan Li
XZXinming Zhao
Xinming Zhao
ZZZheng Zhu
Zheng Zhu
Lung parenchyma segmentation is valuable for improving the performance of lung nodule detection in computed tomography (CT) images. Traditionally, the two tasks are performed separately. This paper proposes a deep multi-task learning (MTL) approach to integrate these tasks for better lung nodule detection. Three new ideas lead to our proposed approach. First, lung parenchyma segmentation is used as the attention module and is combined with nodule detection in a single deep network. Second, lung nodule detection is performed in an anchor-free manner by dividing it into two subtasks, nodule center identification and nodule size regression. Third, a novel pyramid dilated convolution block (PDCB) is proposed to utilize the advantage of dilated convolution and tackle its gridding problem for better lung parenchyma segmentation. Based on these ideas, we design our end-to-end deep network architecture and corresponding MTL method to achieve lung parenchyma segmentation and nodule detection simultaneously. We evaluate the proposed approach on the commonly used Lung Nodule Analysis 2016 (LUNA16) dataset. The experimental results show the value of our contributions and demonstrate that our approach can yield significant improvements compared with state-of-the-art counterparts.

6 June 2018 in Medical & Biological Engineering & Computing
Verified
Journal Article
Closed access
PDF file
GHGuanghui Han
Guanghui Han
XLXiabi Liu
Xiabi Liu
GZGuangyuan Zheng
Guangyuan Zheng
MWMurong Wang
Murong Wang
SHShan Huang
Shan Huang

1 March 2015 in Computerized Medical Imaging and Graphics
Verified
Journal Article
Closed access
LMLing Ma
Ling Ma
XLXiabi Liu
Xiabi Liu
LSLi Song
Li Song
CZChunwu Zhou
Chunwu Zhou
XZXinming Zhao
Xinming Zhao
YZYanfeng Zhao
Yanfeng Zhao