KANNAN BALAKRISHNAN

Dr. KANNAN BALAKRISHNAN

orcid

Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
13 February 2014 in Retrovirology
Verified
Journal Article
Open access
PDF file
ABAtoshi Banerjee
Atoshi Banerjee
RBRonald Babu
Ronald Babu
KBKANNAN BALAKRISHNAN
KANNAN BALAKRISHNAN
PGPayel Ghosh
Payel Ghosh
SBSharmistha Banerjee
Sharmistha Banerjee
The export of intron containing viral RNAs from the nucleus to the cytoplasm is an essential step in the life cycle of Human Immunodeficiency Virus-1 (HIV-1). As the eukaryotic system does not permit the transport of intron containing RNA out of the nucleus, HIV-1 makes a regulatory protein, Rev, that mediates the transportation of unspliced and partially spliced viral mRNA from the nucleus to the cytoplasm, thereby playing a decisive role in the generation of new infectious virus particles. Therefore, the host factors modulating the RNA export activity of Rev can be major determinants of virus production in an infected cell.

12 November 2022 in Viruses
Verified
Journal Article
Open access
PDF file
SSSatarupa Sarkar
Satarupa Sarkar
KBKANNAN BALAKRISHNAN
KANNAN BALAKRISHNAN
KCKumaraswami Chintala
Kumaraswami Chintala
KMKrishnaveni Mohareer
Krishnaveni Mohareer
TLTom Lüdde
Tom Lüdde
SBSharmistha Banerjee
Sharmistha Banerjee
Human immunodeficiency virus-1 (HIV-1) is a retrovirus that integrates its reverse-transcribed genome as proviral DNA into the host genome to establish a successful infection. The viral genome integration requires safeguarding the subviral complexes, reverse transcription complex (RTC) and preintegration complex (PIC), in the cytosol from degradation, presumably effectively secured by the capsid surrounding these complexes. An intact capsid, however, is a large structure, which raises concerns about its translocation from cytoplasm to nucleus crossing the nuclear membrane, guarded by complex nuclear pore structures, which do not allow non-specific transport of large molecules. In addition, the generation of new virions requires the export of incompletely processed viral RNA from the nucleus to the cytoplasm, an event conventionally not permitted through mammalian nuclear membranes. HIV-1 has evolved multiple mechanisms involving redundant host pathways by liaison with the cell’s nucleocytoplasmic trafficking system, failure of which would lead to the collapse of the infection cycle. This review aims to assemble the current developments in temporal and spatial events governing nucleocytoplasmic transport of HIV-1 factors. Discoveries are anticipated to serve as the foundation for devising host-directed therapies involving selective abolishment of the critical interactomes between viral proteins and their host equivalents.

8 December 2021 in Viruses
Verified
Journal Article
Open access
PDF file
KBKANNAN BALAKRISHNAN
KANNAN BALAKRISHNAN
AVAnanda Ayyappan Jaguva Vasudevan
Ananda Ayyappan Jaguva Vasudevan
KMKrishnaveni Mohareer
Krishnaveni Mohareer
TLTom Lüdde
Tom Lüdde
Carstem MünkCarstem Münk
Carstem Münk
SBSharmistha Banerjee
Sharmistha Banerjee
Staufen, the RNA-binding family of proteins, affects various steps in the Human Immuno-Deficiency Virus (HIV-1) replication cycle. While our previous study established Staufen-2–HIV-1 Rev interaction and its role in augmenting nucleocytoplasmic export of RRE-containing viral RNA, viral incorporation of Staufen-2 and its effect on viral propagation were unknown. Here, we report that Staufen-2 interacts with HIV-1 Gag and is incorporated into virions and that encapsidated Staufen-2 boosted viral infectivity. Further, Staufen-2 gets co-packaged into virions, possibly by interacting with host factors Staufen-1 or antiviral protein APOBEC3G, which resulted in different outcomes on the infectivity of Staufen-2-encapsidated virions. These observations suggest that encapsidated host factors influence viral population dynamics and infectivity. With the explicit identification of the incorporation of Staufen proteins into HIV-1 and other retroviruses, such as Simian Immunodeficiency Virus (SIV), we propose that packaging of RNA binding proteins, such as Staufen, in budding virions of retroviruses is probably a general phenomenon that can drive or impact the viral population dynamics, infectivity, and evolution.