Optical Earth Observation is often limited by weather conditions such as cloudiness. Radar sensors have the potential to overcome these limitations, however, due to the complex radar-surface interaction, the retrieving of crop biophysical variables using this technology remains an open challenge. Aiming to simultaneously benefit from the optical domain background and the all-weather imagery provided by radar systems, we propose a data fusion approach focused on the cross-correlation between radar and optical data streams. To do so, we analyzed several multiple-output Gaussian processes (MOGP) models and their ability to fuse efficiently Sentinel-1 (S1) Radar Vegetation Index (RVI) and Sentinel-2 (S2) vegetation water content (VWC) time series over a dry agri-environment in southern Argentina. MOGP models not only exploit the auto-correlations of S1 and S2 data streams independently but also the inter-channel cross-correlations. The S1 RVI and S2 VWC time series at the selected study sites being the inputs of the MOGP models proved to be closely correlated. Regarding the set of assessed models, the Convolutional Gaussian model (CONV) delivered noteworthy accurate data fusion results over winter wheat croplands belonging to the 2020 and 2021 campaigns ($NRMS{E}_{wheat2020}$ = 16.1%; $NRMS{E}_{wheat2021}$ = 10.1%). Posteriorly, we removed S2 observations from the S1 & S2 dataset corresponding to the complete phenological cycles of winter wheat from September to the end of December to simulate the presence of clouds in the scenes and applied the CONV model at the pixel level to reconstruct spatiotemporally-latent VWC maps. After applying the fusion strategy, the phenology of winter wheat was successfully recovered in the absence of optical data. Strong correlations were obtained between S2 VWC and S1 & S2 MOGP VWC reconstructed maps for the assessment dates (${\overline{R^2}}_{wheat-2020}$ = 0.95, ${\overline{R^2}}_{wheat-2021}$ = 0.96). Altogether, the fusion of S1 SAR and S2 optical EO data streams with MOGP offers a powerful innovative approach for cropland trait monitoring over cloudy high-latitude regions.

Earth observation offers an unprecedented opportunity to monitor intensively cultivated areas providing key support to assess fertilizer needs and crop water uptake. Routinely, vegetation traits mapping can help farmers to monitor plant development along the crop’s phenological cycle, which is particularly relevant for irrigated agricultural areas. The high spatial and temporal resolution of the Sentinel-2 (S2) multispectral instrument leverages the possibility to estimate leaf area index (LAI), canopy chlorophyll content (CCC), and vegetation water content (VWC) from space. Therefore, our study presents a hybrid retrieval workflow combining a physically-based strategy with a machine learning regression algorithm, i.e., Gaussian processes regression, and an active learning technique to estimate LAI, CCC and VWC of irrigated winter wheat. The established hybrid models of the three traits were validated against in-situ data of a wheat campaign in the Bonaerense valley, South of the Buenos Aires Province, Argentina, in the year 2020. We obtained good to highly accurate validation results with LAI: R${}^2$ = 0.92, RMSE = 0.43 m${}^2$ m${}^{-2}$, CCC: R${}^2$ = 0.80, RMSE = 0.27 g m${}^{-2}$ and VWC: R${}^2$ = 0.75, RMSE = 416 g m${}^{-2}$. The retrieval models were also applied to a series of S2 images, producing time series along the seasonal cycle, which reflected the effects of fertilizer and irrigation on crop growth. The associated uncertainties along with the obtained maps underlined the robustness of the hybrid retrieval workflow. We conclude that processing S2 imagery with optimised hybrid models allows accurate space-based crop traits mapping over large irrigated areas and thus can support agricultural management decisions.

Synthetic aperture radar (SAR) data provides an appealing opportunity for all-weather day or night Earth surface monitoring. The European constellation Sentinel-1 (S1) consisting of S1-A and S1-B satellites offers a suitable revisit time and spatial resolution for the observation of croplands from space. The C-band radar backscatter is sensitive to vegetation structure changes and phenology as well as soil moisture and roughness. It also varies depending on the local incidence angle (LIA) of the SAR acquisition’s geometry. The LIA backscatter dependency could therefore be exploited to improve the retrieval of the crop biophysical variables. The availability of S1 radar time-series data at distinct observation angles holds the feasibility to retrieve leaf area index (LAI) evolution considering spatiotemporal coverage of intensively cultivated areas. Accordingly, this research presents a workflow merging multi-date S1 smoothed data acquired at distinct LIA with a Gaussian processes regression (GPR) and a cross-validation (CV) strategy to estimate cropland LAI of irrigated winter wheat. The GPR-S1-LAI model was tested against in situ data of the 2020 winter wheat campaign in the irrigated valley of Colorador river, South of Buenos Aires Province, Argentina. We achieved adequate validation results for LAI with R${}_{CV}^2$ = 0.67 and RMSE${}_{CV}$ = 0.88 m${}^2$ m${}^{-2}$. The trained model was further applied to a series of S1 stacked images, generating temporal LAI maps that well reflect the crop growth cycle. The robustness of the retrieval workflow is supported by the associated uncertainties along with the obtained maps. We found that processing S1 smoothed imagery with distinct acquisition geometries permits accurate radar-based LAI modeling throughout large irrigated areas and in consequence can support agricultural management practices in cloud-prone agri-environments.