Svyatoslav Tkachenko

Dr. Svyatoslav Tkachenko

Case Western Reserve University, Cleveland, Georgia, USA
orcid

Research Focus & Metrics

Academic Career Length

5Years (2022-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 January 2024 in Arteriosclerosis, Thrombosis, and Vascular Biology
Verified
Journal Article
Closed access
JSJunchul Shin
Junchul Shin
JHJunyoung Hong
Junyoung Hong
JEJonnelle Edwards-Glenn
Jonnelle Edwards-Glenn
IKIrene Krukovets
Irene Krukovets
STSvyatoslav Tkachenko
Svyatoslav Tkachenko
OCOlga Cherepanova
Olga Cherepanova
BACKGROUND: Biological sex differences play a vital role in cardiovascular diseases, including atherosclerosis. The endothelium is a critical contributor to cardiovascular pathologies since endothelial cells (ECs) regulate vascular tone, redox balance, and inflammatory reactions. Although EC activation and dysfunction play an essential role in the early and late stages of atherosclerosis development, little is known about sex-dependent differences in EC. METHODS: We used human and mouse aortic EC as well as EC-lineage tracing ( Cdh5 -CreERT2 Rosa-YFP [yellow fluorescence protein]) atherosclerotic Apoe –/– mice to investigate the biological sexual dimorphism of the EC functions in vitro and in vivo. Bioinformatics analyses were performed on male and female mouse aortic EC and human lung and aortic EC. RESULTS: In vitro, female human and mouse aortic ECs showed more apoptosis and higher cellular reactive oxygen species levels than male EC. In addition, female mouse aortic EC had lower mitochondrial membrane potential (ΔΨm), lower TFAM (mitochondrial transcription factor A) levels, and decreased angiogenic potential (tube formation, cell viability, and proliferation) compared with male mouse aortic EC. In vivo, female mice had significantly higher lipid accumulation within the aortas, impaired glucose tolerance, and lower endothelial-mediated vasorelaxation than males. Using the EC-lineage tracing approach, we found that female lesions had significantly lower rates of intraplaque neovascularization and endothelial-to-mesenchymal transition within advanced atherosclerotic lesions but higher incidents of missing EC lumen coverage and higher levels of oxidative products and apoptosis. RNA-seq analyses revealed that both mouse and human female EC had higher expression of genes associated with inflammation and apoptosis and lower expression of genes related to angiogenesis and oxidative phosphorylation than male EC. CONCLUSIONS: Our study delineates critical sex-specific differences in EC relevant to proinflammatory, pro-oxidant, and angiogenic characteristics, which are entirely consistent with a vulnerable phenotype in females. Our results provide a biological basis for sex-specific proatherosclerotic mechanisms.

4 April 2022 in Circulation Research
Verified
Journal Article
Closed access
PDF file
AYAlexander Young
Alexander Young
LBLeigh A. Bradley
Leigh A. Bradley
EFElizabeth Farrar
Elizabeth Farrar
HBHelen O. Bilcheck
Helen O. Bilcheck
STSvyatoslav Tkachenko
Svyatoslav Tkachenko
MWMatthew Wolf
Matthew Wolf
Background: DYRK1a (dual-specificity tyrosine phosphorylation-regulated kinase 1a) contributes to the control of cycling cells, including cardiomyocytes. However, the effects of inhibition of DYRK1a on cardiac function and cycling cardiomyocytes after myocardial infarction (MI) remain unknown. Methods: We investigated the impacts of pharmacological inhibition and conditional genetic ablation of DYRK1a on endogenous cardiomyocyte cycling and left ventricular systolic function in ischemia-reperfusion (I/R) MI using αMHC-MerDreMer-Ki67p-RoxedCre::Rox-Lox-tdTomato-eGFP ( RLTG ) (denoted αDKRC::RLTG ) and αMHC-Cre::Fucci2aR::DYRK1a flox/flox mice. Results: We observed that harmine, an inhibitor of DYRK1a, improved left ventricular ejection fraction (39.5±1.6% and 29.1±1.6%, harmine versus placebo, respectively), 2 weeks after I/R MI. Harmine also increased cardiomyocyte cycling after I/R MI in αDKRC::RLTG mice, 10.8±1.5 versus 24.3±2.6 enhanced Green Fluorescent Protein (eGFP)+ cardiomyocytes, placebo versus harmine, respectively, P =1.0×10 − 3 . The effects of harmine on left ventricular ejection fraction were attenuated in αDKRC::DTA mice that expressed an inducible diphtheria toxin in adult cycling cardiomyocytes. The conditional cardiomyocyte-specific genetic ablation of DYRK1a in αMHC-Cre::Fucci2aR::DYRK1a flox/flox (denoted DYRK1a k/o ) mice caused cardiomyocyte hyperplasia at baseline (210±28 versus 126±5 cardiomyocytes per 40× field, DYRK1a k/o versus controls, respectively, P =1.7×10 − 2 ) without changes in cardiac function compared with controls, or compensatory changes in the expression of other DYRK isoforms. After I/R MI, DYRK1a k/o mice had improved left ventricular function (left ventricular ejection fraction 41.8±2.2% and 26.4±0.8%, DYRK1a k/o versus control, respectively, P =3.7×10 −2 ). RNAseq of cardiomyocytes isolated from αMHC-Cre::Fucci2aR::DYRK1a flox/flox and αMHC-Cre::Fucci2aR mice after I/R MI or Sham surgeries identified enrichment in mitotic cell cycle genes in αMHC-Cre::Fucci2aR::DYRK1a flox/flox compared with αMHC-Cre::Fucci2aR . Conclusions: The pharmacological inhibition or cardiomyocyte-specific ablation of DYRK1a caused baseline hyperplasia and improved cardiac function after I/R MI, with an increase in cell cycle gene expression, suggesting the inhibition of DYRK1a may serve as a therapeutic target to treat MI.

21 September 2022 in Cells
Verified
Journal Article
Open access
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SGSarin Gole
Sarin Gole
STSvyatoslav Tkachenko
Svyatoslav Tkachenko
TMTarek Masannat
Tarek Masannat
RBRichard A. Baylis
Richard A. Baylis
OCOlga Cherepanova
Olga Cherepanova
Despite many decades of research, complications of atherosclerosis resulting from the rupture or erosion of unstable plaques remain the leading cause of death worldwide. Advances in cellular lineage tracing techniques have allowed researchers to begin investigating the role of individual cell types in the key processes regulating plaque stability, including maintenance of the fibrous cap, a protective collagen-rich structure that underlies the endothelium. This structure was previously thought to be entirely derived from smooth muscle cells (SMC), which migrated from the vessel wall. However, recent lineage tracing studies have identified endothelial cells (EC) as an essential component of this protective barrier through an endothelial-to-mesenchymal transition (EndoMT), a process that has previously been implicated in pulmonary, cardiac, and kidney fibrosis. Although the presence of EndoMT in atherosclerotic plaques has been shown by several laboratories using EC-lineage tracing mouse models, whether EndoMT is detrimental (i.e., worsening disease progression) or beneficial (i.e., an athero-protective response that prevents plaque instability) remains uncertain as there are data to support both possibilities, which will be further discussed in this review.

31 July 2026 in Functional & Integrative Genomics
Verified
Journal Article
Open access
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STSvyatoslav Tkachenko
Svyatoslav Tkachenko
SLShih-Hsing Leir
Shih-Hsing Leir
AWArnaud J. Van Wettere
Arnaud J. Van Wettere
IPIuri Viotti Perisse
Iuri Viotti Perisse
YMYasmin Mustafa
Yasmin Mustafa
AHAnn Harris
Ann Harris
The sheep lung has long been used to model aspects of the human lung, both its normal development and pathological changes that occur in ovine models of lung disease. The similarities between the two species provide an opportunity to investigate phases of lung development that are not accessible for investigation in humans, for example later in gestation. Here we use single cell (sc) RNA-seq to investigate the developmental dynamics of the sheep proximal and distal lung from mid gestation (80 days) through late gestation (120 days) and term (147 days). We identify changes in cell identity and abundance between the time points that illustrate many key features of mesenchymal, endothelial, and epithelial differentiation. Lastly we compare the single cell profiles through development of wildtype (WT) sheep with those of animals of the same breed engineered to have a loss-of-function mutation in the cystic fibrosis transmembrane conductance regulator ( CFTR ) gene. Mutations in CFTR cause cystic fibrosis (CF) and the CFTR −/− sheep exhibit many features of CF in humans. The results identify cellular signatures in the CFTR −/− lung before birth that may facilitate the understanding of clinical features of CF in early postnatal life.

16 May 2026 in bioRxiv
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Preprint
Open access
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STSvyatoslav Tkachenko
Svyatoslav Tkachenko
MHMichael Hinczewski
Michael Hinczewski
CMChristopher D McFarland
Christopher D McFarland
Cancer progression is increasingly understood as an evolutionary process shaped not only by competition but also by cooperative interactions including those mediated through diffusible “public goods” (PGs). Classical evolutionary game theory predicts that PG-producing (altruistic) subclones cannot invade well-mixed populations of non-producers, creating a paradox given their observed emergence in tumors. Here, we resolve this contradiction by combining stochastic spatial simulations with an analytically tractable Moran model to study the invasion dynamics of PG-producing cells in structured populations. Starting from a single producer cell, we explicitly model stochastic PG secretion, diffusion, binding/unbinding, and cell proliferation across biologically relevant parameter ranges. We demonstrate that spatial structure fundamentally alters invasion dynamics, enabling PG producers to invade and establish even when production incurs a fitness cost. Both numerical and analytical approaches converge on a key unifying parameter, a characteristic length scale δ , that captures the combined effects of diffusivity, binding kinetics, and degradation. This length scale determines the spatial extent of PG availability and thus the selective advantage of producers. We identify distinct regimes: when PGs are localized (small δ ), producers preferentially benefit and invasion is likely; when PGs are widely dispersed (large δ ), benefits are shared and invasion approaches neutrality or is suppressed by costs. Our results highlight that invasion of cooperative traits is governed by spatially mediated resource localization rather than intrinsic fitness alone. This framework provides a mechanistic basis for understanding the emergence of cooperative subclones in tumors and suggests that modulating biophysical transport properties of signaling molecules could influence tumor evolution, metastasis, and therapeutic resistance.