Johid Malik

Dr. Johid Malik

orcid

Research Focus & Metrics

Academic Career Length

4Years (2023-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
Verified
Journal Article
Open access
PDF file
JMJohid Malik
Johid Malik
AAArpan Acharya
Arpan Acharya
SASean Avedissian
Sean Avedissian
SBSiddappa Byrareddy
Siddappa Byrareddy
CFCourtney V Fletcher
Courtney V Fletcher
SDShetty Ravi Dyavar
Shetty Ravi Dyavar
Angiotensin Converting Enzyme 2 (ACE-2), Transmembrane Serine Protease 2 (TMPRSS-2) and Neuropilin-1 cellular receptors support the entry of SARS-CoV-2 into susceptible human target cells and are characterized at the molecular level. Some evidence on the expression of entry receptors at mRNA and protein levels in brain cells is available, but co-expression of these receptors and confirmatory evidence on brain cells is lacking. SARS-CoV-2 infects some brain cell types, but infection susceptibility, multiple entry receptor density, and infection kinetics are rarely reported in specific brain cell types. Highly sensitive Taqman ddPCR, flow-cytometry and immunocytochemistry assays were used to quantitate the expression of ACE-2, TMPRSS-2 and Neuropilin-1 at mRNA and protein levels on human brain-extracted pericytes and astrocytes, which are an integral part of the Blood-Brain-Barrier (BBB). Astrocytes showed moderate ACE-2 (15.9 ± 1.3%, Mean ± SD, n = 2) and TMPRSS-2 (17.6%) positive cells, and in contrast show high Neuropilin-1 (56.4 ± 39.8%, n = 4) protein expression. Whereas pericytes showed variable ACE-2 (23.1 ± 20.7%, n = 2), Neuropilin-1 (30.3 ± 7.5%, n = 4) protein expression and higher TMPRSS-2 mRNA (667.2 ± 232.3, n = 3) expression. Co-expression of multiple entry receptors on astrocytes and pericytes allows entry of SARS-CoV-2 and progression of infection. Astrocytes showed roughly four-fold more virus in culture supernatants than pericytes. SARS-CoV-2 cellular entry receptor expression and “in vitro” viral kinetics in astrocytes and pericytes may improve our understanding of viral infection “in vivo”. In addition, this study may facilitate the development of novel strategies to counter the effects of SARS-CoV-2 and inhibit viral infection in brain tissues to prevent the spread and interference in neuronal functions.

23 November 2023 in Cancer Medicine
Verified
Journal Article
Open access
JMJohid Malik
Johid Malik
APAnthony T Podany
Anthony T Podany
PKParvez Khan
Parvez Khan
CSChristopher L. Shaffer
Christopher L. Shaffer
Jawed A SiddiquiJawed A Siddiqui
Jawed A Siddiqui
SASean Avedissian
Sean Avedissian
Background: Pediatric brain tumors (PBT) stand as the leading cause of cancer‐related deaths in children. Chemoradiation protocols have improved survival rates, even for non‐resectable tumors. Nonetheless, radiation therapy carries the risk of numerous adverse effects that can have long‐lasting, detrimental effects on the quality of life for survivors. The pursuit of chemotherapeutics that could obviate the need for radiotherapy remains ongoing. Several anti‐tumor agents, including sunitinib, valproic acid, carboplatin, and panobinostat, have shown effectiveness in various malignancies but have not proven effective in treating PBT. The presence of the blood–brain barrier (BBB) plays a pivotal role in maintaining suboptimal concentrations of anti‐cancer drugs in the central nervous system (CNS). Ongoing research aims to modulate the integrity of the BBB to attain clinically effective drug concentrations in the CNS. However, current findings on the interaction of exogenous chemical agents with the BBB remain limited and do not provide a comprehensive explanation for the ineffectiveness of established anti‐cancer drugs in PBT.Methods: We conducted our search for chemotherapeutic agents associated with the blood–brain barrier (BBB) using the following keywords: Chemotherapy in Cancer, Chemotherapy in Brain Cancer, Chemotherapy in PBT, BBB Inhibition of Drugs into CNS, Suboptimal Concentration of CNS Drugs, PBT Drugs and BBB, and Potential PBT Drugs. We reviewed each relevant article before compiling the information in our manuscript. For the generation of figures, we utilized BioRender software.Focus: We focused our article search on chemical agents for PBT and subsequently investigated the role of the BBB in this context. Our search criteria included clinical trials, both randomized and non‐randomized studies, preclinical research, review articles, and research papers.Finding: Our research suggests that, despite the availability of potent chemotherapeutic agents for several types of cancer, the effectiveness of these chemical agents in treating PBT has not been comprehensively explored. Additionally, there is a scarcity of studies examining the role of the BBB in the suboptimal outcomes of PBT treatment, despite the effectiveness of these drugs for other types of tumors.

27 April 2023 in Journal of Neuroscience Methods
Verified
Journal Article
Closed access
JMJohid Malik
Johid Malik
CFCourtney V Fletcher
Courtney V Fletcher
APAnthony T Podany
Anthony T Podany
SDShetty Ravi Dyavar
Shetty Ravi Dyavar
KSKimberly K. Scarsi
Kimberly K. Scarsi
SASean Avedissian
Sean Avedissian

10 May 2024 in Scientific Reports
Verified
Journal Article
Open access
PDF file
SASean Avedissian
Sean Avedissian
JMJohid Malik
Johid Malik
APAnthony T Podany
Anthony T Podany
MNMichael Neely
Michael Neely
NRNathaniel Rhodes
Nathaniel Rhodes
CFCourtney V Fletcher
Courtney V Fletcher
Three years after SARS-CoV-2 emerged as a global infectious threat, the virus has become endemic. The neurological complications such as depression, anxiety, and other CNS complications after COVID-19 disease are increasing. The brain, and CSF have been shown as viral reservoirs for SARS-CoV-2, yielding a potential hypothesis for CNS effects. Thus, we investigated the CNS pharmacology of orally dosed nirmatrelvir/ritonavir (NMR/RTV). Using both an in vitro and an in vivo rodent model, we investigated CNS penetration and potential pharmacodynamic activity of NMR. Through pharmacokinetic modeling, we estimated the median CSF penetration of NMR to be low at 18.11% of plasma with very low accumulation in rodent brain tissue. Based on the multiples of the 90% maximal effective concentration (EC90) for SARS-CoV-2, NMR concentrations in the CSF and brain do not achieve an exposure level similar to that of plasma. A median of only 16% of all the predicted CSF concentrations in rats were > 3xEC90 (unadjusted for protein binding). This may have implications for viral persistence and neurologic post-acute sequelae of COVID-19 if increased NMR penetration in the CNS leads to decreased CNS viral loads and decreased CNS inflammation.

16 June 2026 in Frontiers in Immunology
Verified
Journal Article
Open access
PDF file
JMJohid Malik
Johid Malik
CFCourtney V. Fletcher
Courtney V. Fletcher
SASean N. N Avedissian
Sean N. N Avedissian
Antigen-binding fragments (Fabs) are emerging biochemical tools for treating and managing several diseases and conditions. Though full-length monoclonal antibodies (mAbs) have great potential, their higher molecular size, time required for generation, and cost remain major limiting factors. Fabs, being smaller and having similar affinity to mAbs for their target, can reach the affected site easily, where penetration of mAb might be hindered. Additionally, with fewer amino acids than mAbs, Fabs can be genetically engineered for the required function. In the present work, we have used a combination of state-of-the-art technologies and classical methods for Fab generation from a single B cell of rhesus macaque previously immunized with factor H binding protein (FHbp) of Neisseria meningitidis (Nm). FHbp was selected for its potency as an immunogen and importance in vaccine development against Nm. Using conjugated FHbp as a bait to sort single B cells, expressing antibodies against FHbp increases the probability of finding antigen-specific B cells. We have not only developed a protocol for Fab generation but also provided proof of concept for increasing the yield of toxic or poorly expressed proteins in bacteria by the inclusion of ethanol in bacterial culture.

3 October 2026 in Cellular and Molecular Neurobiology
Verified
Journal Article
Open access
PDF file
JMJohid Malik
Johid Malik
UMUkamaka O. Modebelu
Ukamaka O. Modebelu
CFCourtney V Fletcher
Courtney V Fletcher
SBSiddappa Byrareddy
Siddappa Byrareddy
RARobbyn Anand
Robbyn Anand
SASean Avedissian
Sean Avedissian
The blood–brain barrier (BBB) and blood–cerebrospinal fluid barrier (BCSFB) are dynamic neurovascular interfaces that maintain central nervous system (CNS) homeostasis by tightly regulating paracellular and transcellular molecular transport. Intercellular communication between adjacent cells is critical for maintaining barrier function. Also, serum protein binding is a key factor influencing central nervous system (CNS) penetration. Accurate in vitro BBB and BCSFB models that recapitulate these physiological interactions offer valuable alternatives to animal-based systems for screening CNS targeted drugs. Building upon our published human primary cell–based BBB model, we employed complementary BBB and BCSFB systems to evaluate the permeability of nine antiviral agents/drugs (AVs) under low (L) and high (H) serum conditions. Barrier integrity was confirmed by transepithelial electrical resistance (TEER) and FITC-dextran permeability assays. In H serum, AVs like dolutegravir and efavirenz with extensive protein binding demonstrated significantly reduced permeability across both barriers. These in vitro permeability profiles were fairly consistent with reported higher clinical cerebrospinal fluid concentrations for drugs that exhibit low protein binding. Furthermore, astrocytes exposed to dolutegravir and emtricitabine indicated upregulation of ATP-binding cassette transporter multidrug resistance protein (MRP1) and P-glycoprotein, while lacking breast cancer resistant protein and MRP4 transporters, additional factors for low CNS concentration of AVs. Our validated in vitro BBB and BCSFB models reproduce clinically relevant patterns of CNS antiviral penetration. These systems, with further optimization, can provide reliable, human-relevant platforms for preclinical CNS drug screening and align with current efforts to reduce animal use in biomedical research.