Ling Yin

Dr. Ling Yin


Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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8 December 2016 in Frontiers in Plant Science
Verified
Journal Article
Open access
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SWSimon J. Williams
Simon J. Williams
LYLing Yin
Ling Yin
GFGabriel Foley
Gabriel Foley
LCLachlan W. Casey
Lachlan W. Casey
MOMegan A. Outram
Megan A. Outram
BKBostjan Kobe
Bostjan Kobe
The N-terminal Toll/interleukin-1 receptor/resistance protein (TIR) domain has been shown to be both necessary and sufficient for defense signaling in the model plants flax and Arabidopsis. In examples from these organisms, TIR domain self-association is required for signaling function, albeit through distinct interfaces. Here, we investigate these properties in the TIR domain containing resistance protein RPV1 from the wild grapevine Muscadinia rotundifolia. The RPV1 TIR domain, without additional flanking sequence present, is autoactive when transiently expressed in tobacco, demonstrating that the TIR domain alone is capable of cell-death signaling. We determined the crystal structure of the RPV1 TIR domain at 2.3 Å resolution. In the crystals, the RPV1 TIR domain forms a dimer, mediated predominantly through residues in the αA and αE helices (“AE” interface). This interface is shared with the interface discovered in the dimeric complex of the TIR domains from the Arabidopsis RPS4/RRS1 resistance protein pair. We show that surface-exposed residues in the AE interface that mediate the dimer interaction in the crystals are highly conserved among plant TIR domain-containing proteins. While we were unable to demonstrate self-association of the RPV1 TIR domain in solution or using yeast 2-hybrid, mutations of surface-exposed residues in the AE interface prevent the cell-death autoactive phenotype. In addition, mutation of residues known to be important in the cell-death signaling function of the flax L6 TIR domain were also shown to be required for RPV1 TIR domain mediated cell-death. Our data demonstrate that multiple TIR domain surfaces control the cell-death function of the RPV1 TIR domain and we suggest that the conserved AE interface may have a general function in TIR-NLR signaling.

1 January 2016 in Phytopathology®
Verified
Journal Article
Open access
YYYing Yu
Ying Yu
LJLi Jiao
Li Jiao
SFShufang Fu
Shufang Fu
LYLing Yin
Ling Yin
YZYali Zhang
Yali Zhang
JLJiang Lu
Jiang Lu
The deposition of callose is a common plant defense response to intruding pathogens and part of the plant’s innate immunity. In this study, eight grapevine callose synthase (CalS) genes were identified and characterized. To investigate biological function of CalS in grapevine against the infection of Plasmopara viticola, expression patterns of grapevine CalS family genes were analyzed among resistant/susceptible cultivars. After P. viticola infection, expression of CalS1, 3, 7, 8, 9, 10, and 11 were significantly modified among the grapevine cultivars. For example, the expression of CalS1 and CalS10 were greatly increased in downy mildew (DM)-immune Muscadinia rotundifolia ‘Carlos’ and ‘Noble’. Transient expression assay with promoters of the CalS1 and CalS10 genes confirmed that they were regulated by the oomycete pathogen P. viticola. CalS1 promoter activity was also significantly up-regulated by ABA in DM-immune M. rotundifolia ‘Noble’, but down-regulated in DM-susceptible Vitis vinifera ‘Chardonnay’. The CalS1 promoter, however, was also down-regulated by GA in ‘Chardonnay’, but not affected in ‘Noble’. The promoter activity of CalS10 was significantly up-regulated by GA in ‘Chardonnay’, but not regulated by ABA at all. It is proposed that CalS1 and CalS10 were involved in grapevine defense against DM disease.

1 July 2021 in Horticulture Research
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Journal Article
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JQJunjie Qu
Junjie Qu
IDIan Dry
Ian Dry
LLLulu Liu
Lulu Liu
ZGZexi Guo
Zexi Guo
LYLing Yin
Ling Yin
Grapevine downy mildew (DM) is a destructive oomycete disease of viticulture worldwide.MrRPV1is a typical TIR-NBS-LRR type DM disease resistance gene cloned from the wild North American grapevine speciesMuscadinia rotundifolia. However, the molecular basis of resistance mediated byMrRPV1remains poorly understood. Downy mildew-susceptibleVitis viniferacv. Shiraz was transformed with a genomic fragment containingMrRPV1to produce DM-resistant transgenic Shiraz lines. Comparative transcriptome analysis was used to compare the transcriptome profiles of the resistant and susceptible genotypes after DM infection. Transcriptome modulation during the response toP. viticolainfection was more rapid, and more genes were induced inMrRPV1-transgenic Shiraz than in wild-type plants. In DM-infectedMrRPV1-transgenic plants, activation of genes associated with Ca2+release and ROS production was the earliest transcriptional response. Functional analysis of differentially expressed genes revealed that key genes related to multiple phytohormone signaling pathways and secondary metabolism were highly induced during infection. Coexpression network and motif enrichment analysis showed that WRKY and MYB transcription factors strongly coexpress with stilbene synthase (VvSTS) genes during defense againstP. viticolainMrRPV1-transgenic plants. Taken together, these findings indicate that multiple pathways play important roles inMrRPV1-mediated resistance to downy mildew.