Ali Nabi Duman

Dr. Ali Nabi Duman

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Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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29 July 2024 in Materials Advances
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ADAli Nabi Duman
Ali Nabi Duman
AJAlmaz Jalilov
Almaz Jalilov
One of the hottest topics in nanoparticles research right now is carbon dots (CDs).

7 October 2015 in Foundations of Physics
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MBMiriam Backens
Miriam Backens
ADAli Nabi Duman
Ali Nabi Duman

19 September 2018 in International Journal of Genomics
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ADAli Nabi Duman
Ali Nabi Duman
HPHarun Pirim
Harun Pirim
Persistent homology, a topological data analysis (TDA) method, is applied to microarray data sets. Although there are a few papers referring to TDA methods in microarray analysis, the usage of persistent homology in the comparison of several weighted gene coexpression networks (WGCN) was not employed before to the very best of our knowledge. We calculate the persistent homology of weighted networks constructed from 38 Arabidopsis microarray data sets to test the relevance and the success of this approach in distinguishing the stress factors. We quantify multiscale topological features of each network using persistent homology and apply a hierarchical clustering algorithm to the distance matrix whose entries are pairwise bottleneck distance between the networks. The immunoresponses to different stress factors are distinguishable by our method. The networks of similar immunoresponses are found to be close with respect to bottleneck distance indicating the similar topological features of WGCNs. This computationally efficient technique analyzing networks provides a quick test for advanced studies.

1 January 2021 in Ultramicroscopy
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ADAli Nabi Duman
Ali Nabi Duman

3 September 2017 in Coatings
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ADAli Nabi Duman
Ali Nabi Duman
BYBekir Yilbas
Bekir Yilbas
HPHarun Pirim
Harun Pirim
HAHaider Ali
Haider Ali
Due to recent climate change-triggered, regular dust storms in the Middle East, dust mitigation has become the critical issue for solar energy harvesting devices. One of the methods to minimize and prevent dust adhesion and create self-cleaning abilities is to generate hydrophobic characteristics on surfaces. The purpose of this study is to explore the topological features of hydrophobic surfaces. We use non-standard techniques from topological data analysis to extract morphological features from the AFM images. Our method recovers most of the previous qualitative observations in a robust and quantitative way. Persistence diagrams, which is a summary of topological structures, witness quantitatively that the crystallized polycarbonate (PC) surface possesses spherulites, voids, and fibrils, and the texture height and spherulite concentration increases with the increased immersion period. The approach also shows that the polydimethylsiloxane (PDMS) exactly copied the structures at the PC surface but 80 to 90 percent of the nanofibrils were not copied at PDMS surface. We next extract a feature vector from each persistence diagram to show which experiments hold features with similar variance using principal component analysis (PCA). The K-means clustering algorithm is applied to the matrix of feature vectors to support the PCA result, grouping experiments with similar features.

15 October 2011 in Journal of Algebra
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AAAlejandro Adem
Alejandro Adem
ADAli Nabi Duman
Ali Nabi Duman
JGJosé Manuel Gómez
José Manuel Gómez