Mislav Bobić

Dr. Mislav Bobić

Department of Radiation Oncology, Harvard Medical School, Massachusetts General Hospital, Boston, Massachusetts, USA
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Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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17 March 2021 in Radiotherapy and Oncology
Verified
Journal Article
Closed access
ALArthur Lalonde
Arthur Lalonde
Mislav BobićMislav Bobić
Mislav Bobić
BWBrian Winey
Brian Winey
JVJoost Verburg
Joost Verburg
GSGregory C. Sharp
Gregory C. Sharp
HPHarald Paganetti
Harald Paganetti

25 February 2021 in Physics in Medicine & Biology
Verified
Journal Article
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Mislav BobićMislav Bobić
Mislav Bobić
ALArthur Lalonde
Arthur Lalonde
GSGregory C Sharp
Gregory C Sharp
CGClemens Grassberger
Clemens Grassberger
JVJoost M Verburg
Joost M Verburg
HPHarald Paganetti
Harald Paganetti
The high conformality of intensity-modulated proton therapy (IMPT) dose distributions causes treatment plans to be sensitive to geometrical changes during the course of a fractionated treatment. This can be addressed using adaptive proton therapy (APT). One important question in APT is the frequency of adaptations performed during a fractionated treatment, which is related to the question whether plan adaptation has to be done online or offline. The purpose of this work is to investigate the impact of weekly and daily online IMPT plan adaptation on the treatment quality for head and neck patients. A cohort of ten head and neck patients with daily acquired cone-beam CT (CBCT) images was evaluated retrospectively. Dose tracking of the IMPT treatment was performed for three scenarios: base plan with no adaptation (BP), weekly online adaptation (OA W ), and daily online adaptation (OA D ). Both adaptation schemes used an in-house developed online APT workflow, performing Monte Carlo dose calculations on scatter-corrected CBCTs. IMPT plan adaptation was achieved by only tuning the weights of a subset of beamlets, based on deformable image registration from the planning CT to each CBCT. Although OA D mitigated random delivery errors more effectively than OA W on a fraction per fraction basis, both OA W and OA D achieved the clinical goals for all ten patients, while BP failed for six cases. In the high-risk CTV, accumulated values of D 98% ranged between 97.15% and 99.73% of the prescription dose for OA D , with a median of 98.07%. For OA W , values between 95.02% and 99.26% were obtained, with a median of 97.61% of the prescription dose. Otherwise, the dose to most organs at risk was similar for all three scenarios. Globally, our results suggest that OA W could be used as an alternative approach to OA D for most patients in order to reduce the clinical workload.

1 April 2022 in Science Advances
Verified
Journal Article
Open access
MMMatthias Meier
Matthias Meier
JHJan Hulva
Jan Hulva
ZJZdenek Jakub
Zdenek Jakub
FKFlorian Kraushofer
Florian Kraushofer
Mislav BobićMislav Bobić
Mislav Bobić
GPGareth S. Parkinson
Gareth S. Parkinson
Heterogeneous catalysts based on subnanometer metal clusters often exhibit strongly size-dependent properties, and the addition or removal of a single atom can make all the difference. Identifying the most active species and deciphering the reaction mechanism is extremely difficult, however, because it is often not clear how the catalyst evolves in operando. Here, we use a combination of atomically resolved scanning probe microscopies, spectroscopic techniques, and density functional theory (DFT)–based calculations to study CO oxidation by a model Pt/Fe 3 O 4 (001) “single-atom” catalyst. We demonstrate that (PtCO) 2 dimers, formed dynamically through the agglomeration of mobile Pt-carbonyl species, catalyze a reaction involving the oxide support to form CO 2 . Pt 2 dimers produce one CO 2 molecule before falling apart into two adatoms, releasing the second CO. O lattice extraction only becomes facile when both the Pt-dimer and the Fe 3 O 4 support can access metastable configurations, suggesting that substantial, concerted rearrangements of both cluster and support must be considered for reactions occurring at elevated temperature.

28 November 2021 in Cancers
Verified
Journal Article
Open access
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KNKonrad Pawel Nesteruk
Konrad Pawel Nesteruk
Mislav BobićMislav Bobić
Mislav Bobić
ALArthur Lalonde
Arthur Lalonde
BWBrian A. Winey
Brian A. Winey
ALAntony J. Lomax
Antony J. Lomax
HPHarald Paganetti
Harald Paganetti
Purpose: To compare the efficacy of CT-on-rails versus in-room CBCT for daily adaptive proton therapy. Methods: We analyzed a cohort of ten head-and-neck patients with daily CBCT and corresponding virtual CT images. The necessity of moving the patient after a CT scan is the most significant difference in the adaptation workflow, leading to an increased treatment execution uncertainty σ. It is a combination of the isocenter-matching σi and random patient movements induced by the couch motion σm. The former is assumed to never exceed 1 mm. For the latter, we studied three different scenarios with σm = 1, 2, and 3 mm. Accordingly, to mimic the adaptation workflow with CT-on-rails, we introduced random offsets after Monte-Carlo-based adaptation but before delivery of the adapted plan. Results: There were no significant differences in accumulated dose-volume histograms and dose distributions for σm = 1 and 2 mm. Offsets with σm = 3 mm resulted in underdosage to CTV and hot spots of considerable volume. Conclusion: Since σm typically does not exceed 2 mm for in-room CT, there is no clinically significant dosimetric difference between the two modalities for online adaptive therapy of head-and-neck patients. Therefore, in-room CT-on-rails can be considered a good alternative to CBCT for adaptive proton therapy.

1 June 2020 in Physica Medica
Verified
Journal Article
Closed access
TRToon Roggen
Toon Roggen
Mislav BobićMislav Bobić
Mislav Bobić
NGNasim Givehchi
Nasim Givehchi
SSStefan G. Scheib
Stefan G. Scheib

30 August 2022 in Physics in Medicine & Biology
Verified
Journal Article
Closed access
HLHoyeon Lee
Hoyeon Lee
JSJungwook Shin
Jungwook Shin
JVJoost M Verburg
Joost M Verburg
Mislav BobićMislav Bobić
Mislav Bobić
BWBrian Winey
Brian Winey
HPHarald Paganetti
Harald Paganetti
Objective. Monte Carlo (MC) codes are increasingly used for accurate radiotherapy dose calculation. In proton therapy, the accuracy of the dose calculation algorithm is expected to have a more significant impact than in photon therapy due to the depth-dose characteristics of proton beams. However, MC simulations come at a considerable computational cost to achieve statistically sufficient accuracy. There have been efforts to improve computational efficiency while maintaining sufficient accuracy. Among those, parallelizing particle transportation using graphic processing units (GPU) achieved significant improvements. Contrary to the central processing unit, a GPU has limited memory capacity and is not expandable. It is therefore challenging to score quantities with large dimensions requiring extensive memory. The objective of this study is to develop an open-source GPU-based MC package capable of scoring those quantities. Approach. We employed a hash-table, one of the key-value pair data structures, to efficiently utilize the limited memory of the GPU and score the quantities requiring a large amount of memory. With the hash table, only voxels interacting with particles will occupy memory, and we can search the data efficiently to determine their address. The hash-table was integrated with a novel GPU-based MC code, moqui. Main results. The developed code was validated against an MC code widely used in proton therapy, TOPAS, with homogeneous and heterogeneous phantoms. We also compared the dose calculation results of clinical treatment plans. The developed code agreed with TOPAS within 2%, except for the fall-off and regions, and the gamma pass rates of the results were >99% for all cases with a 2 mm/2% criteria. Significance. We can score dose-influence matrix and dose-rate on a GPU for a 3-field H&N case with 10 GB of memory using moqui, which would require more than 100 GB of memory with the conventionally used array data structure.