Insect glutathione S-transferases (GSTs) serve critical roles in insecticides and other forms of xenobiotic chemical detoxification. The fall armyworm, Spodoptera frugiperda (J. E. Smith), is a major agricultural pest in several countries, especially Egypt. This is the first study to identify and characterize GST genes in S. frugiperda under insecticidal stress. The present work evaluated the toxicity of emamectin benzoate (EBZ) and chlorantraniliprole (CHP) against the third-instar larvae of S. frugiperda using the leaf disk method. The LC₅₀ values of EBZ and CHP were 0.029 and 1.250 mg/L after 24 h of exposure. Moreover, we identified 31 GST genes, including 28 cytosolic and 3 microsomal SfGSTs from a transcriptome analysis and the genome data of S. frugiperda. Depending on the phylogenetic analysis, sfGSTs were divided into six classes (delta, epsilon, omega, sigma, theta, and microsomal). Furthermore, we investigated the mRNA levels of 28 GST genes using qRT-PCR under EBZ and CHP stress in the third-instar larvae of S. frugiperda. Interestingly, SfGSTe10 and SfGSTe13 stood out with the highest expression after the EBZ and CHP treatments. Finally, a molecular docking model was constructed between EBZ and CHP using the most upregulated genes (SfGSTe10 and SfGSTe13) and the least upregulated genes (SfGSTs1 and SfGSTe2) of S. frugiperda larvae. The molecular docking study showed EBZ and CHP have a high binding affinity with SfGSTe10, with docking energy values of −24.41 and −26.72 kcal/mol, respectively, and sfGSTe13, with docking energy values of −26.85 and −26.78 kcal/mol, respectively. Our findings are important for understanding the role of GSTs in S. frugiperda regarding detoxification processes for EBZ and CHP.

Background: Centella asiatica, a medicinally important species that is rich in bioactive compounds, lacks a characterized mitochondrial genome, despite nuclear and chloroplast assemblies. We sequenced and annotated its mitochondrial genome to elucidate its genetic foundations and evolutionary mechanisms. Methods: Assembly using Illumina short-reads and Nanopore long-reads was used to characterize the mitochondrial genome. Analyses included structural characterization, codon usage bias, repetitive sequences, horizontal gene transfer (HGT), collinearity, and phylogeny. The resulting tissue-specific (root, stem, and leaf) long non-coding RNA (lncRNA) profiles identified RNA editing sites. Results: The complete mitochondrial genome (249,777 bp, 45.5% GC) comprises three circular contigs encoding 51 genes (33 protein-coding, 15 tRNA, and 3 rRNA). Comparative genomics revealed synteny with the Apiaceae family of plants and evidence of HGT. Phylogenetic analysis resolved taxonomic relationships within Apiales. We predicted that 547 RNA editing sites would be identified in its protein-coding genes. Tissue profiling identified 725 (root), 711 (stem), and 668 (leaf) editing sites, with >71% concordance to predictions. RNA editing-generated cryptic promoters/terminators occur in mitochondrial core function genes (e.g., ATP synthase, cytochrome c reductase/oxidase, ribosome large subunit, and cytochrome c biogenesis), exhibiting a lower frequency in the leaves compared to the roots and stems. Conclusions: We provide the first complete mitochondrial genome assembly for C. asiatica, delineating its complex structure, tissue-modulated RNA editing, and evolutionary trajectory. This high-quality genomic resource establishes a foundation for molecular evolutionary studies and enhances the genomic toolkit for this pharmacologically significant species.

The hook of Uncaria rhynchophylla is an important external phenotype representing the quality of Gou-Teng. The hook formation pattern of U. rhynchophylla displays a unique feature that solitary hook and opposite hooks alternately occur in the leaf axils forming a liner series. The solitary hook only grows on the lower side of the leaf axil, resulting from the decline in the total yield of hooks. However, the reasons for solitary hook formation in U. rhynchophylla are not clear. Therefore, a survey on the molecular mechanisms of solitary hook formation needs to be performed urgently. We obtained 250.67 million high-quality clean reads from the lower side of axillary stem segments (HS) and the upper side of axillary stem segments (HSCK) libraries. We detected 42 DEGs (differentially expressed genes) between HS and HSCK libraries; 11 were down-regulated, and 31 were up-regulated. Gene ontology functional classification of the DEGs indicated that they included two genes that encoded LAZY1 related to the regulation of polar auxin transport, two genes that encoded AUX/IAA and AP2/ERF related to plant hormone signaling transduction, and two genes that encoded F3H related to the flavone synthase activity. These six genes were associated with lateral polar auxin transport (PAT) regulation, and their expression level had a high correlation with the pattern of IAA distribution upon gravity stimulation. And the inhibition of solitary hook development was observed after treatment with N-1-naphthylphthalamic acid (NPA) or quercetin, which was known as the polar auxin inhibitor. The above findings might provide new information about the molecular mechanisms of regulation of lateral PAT in the axillary bud development process under gravity.

The flavor variation among different tea plant cultivars significantly influences their economic value. ‘Huangjinya’ (HJY), a typical light-sensitive etiolated tea cultivar, is prized for its fresh and mellow taste with low bitterness and astringency, and commands a high market value, serving as excellent germplasm for breeding superior-flavor tea varieties. Previous studies have largely focused on the mechanisms underlying fresh and umami tastes, whereas the regulatory mechanisms underlying bitterness and astringency remain poorly understood. In this study, two tea plant (Camellia sinensis (L.) O. Kuntze) cultivars with distinct bitterness and astringency phenotypes, namely ‘Fuxuan 9’ (FX) and HJY, were used to investigate the formation mechanism of reduced bitterness and astringency through integrated metabolomic and transcriptomic analyses. Metabolomic profiling identified 601 differentially accumulated metabolites between the two cultivars, which were significantly enriched in the flavonoid biosynthesis pathway. Notably, although the total flavonoid content was higher in HJY, the accumulation of non-esterified catechins (C, EC, EGC), which are key contributors to bitterness, was significantly lower than in FX. By contrast, the levels of esterified catechins (EGCG, GCG) showed no marked differences between cultivars. This distinct accumulation pattern provides a metabolic basis potentially associated with the reduced bitterness and astringency in HJY. Transcriptomic analysis revealed that the catechin biosynthetic gene CsLAR was significantly down-regulated in HJY, consistent with the reduced accumulation of non-esterified catechins. Promoter cloning and functional validation confirmed that the CsLAR promoters in both cultivars were active, which differed by only one regulatory element. Under shading treatment, CsLAR expression in HJY was more sensitive to light and decreased more markedly, suggesting that the expression of CsLAR may be regulated by transcription factors. Furthermore, 385 differentially expressed transcription factors were identified, with predicted binding sites in the CsLAR promoter region, implying their potential involvement in modulating catechin accumulation through modulation of CsLAR expression. Together, these multi-omics findings reveal molecular features potentially contributing to the low bitterness and astringency of HJY, providing a theoretical basis and candidate regulators for breeding tea cultivars with improved flavor profiles.