Li Chen

Dr. Li Chen

orcid

Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 May 2018 in Cell
Verified
Journal Article
Closed access
CJCholsoon Jang
Cholsoon Jang
LCLi Chen
Li Chen
JRJoshua D. Rabinowitz
Joshua D. Rabinowitz

11 March 2019 in Nature Metabolism
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Journal Article
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LCLi Chen
Li Chen
ZZZhaoyue Zhang
Zhaoyue Zhang
AHAtsushi Hoshino
Atsushi Hoshino
HZHenry D. Zheng
Henry D. Zheng
MMMichael Morley
Michael Morley
JRJoshua D. Rabinowitz
Joshua D. Rabinowitz

1 July 2019 in Cancer Research
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Journal Article
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JGJuan Carlos Garcia-Cañaveras
Juan Carlos Garcia-Cañaveras
LCLi Chen
Li Chen
JRJoshua D. Rabinowitz
Joshua D. Rabinowitz
The extracellular milieu of tumors is generally assumed to be immunosuppressive due in part to metabolic factors. Here, we review methods for probing the tumor metabolic microenvironment. In parallel, we consider the resulting available evidence, with a focus on lactate, which is the most strongly increased metabolite in bulk tumors. Limited microenvironment concentration measurements suggest depletion of glucose and modest accumulation of lactate (less than 2-fold). Isotope tracer measurements show rapid lactate exchange between the tumor and circulation. Such exchange is catalyzed by MCT transporters, which cotransport lactate and protons (H+). Rapid lactate exchange seems at odds with tumor lactate accumulation. We propose a potential resolution to this paradox. Because of the high pH of tumor cells relative to the microenvironment, H+-coupled transport by MCTs tends to drive lactate from the interstitium into tumor cells. Accordingly, lactate may accumulate preferentially in tumor cells, not the microenvironment. Thus, although they are likely subject to other immunosuppressive metabolic factors, tumor immune cells may not experience a high lactate environment. The lack of clarity regarding microenvironmental lactate highlights the general need for careful metabolite measurements in the tumor extracellular milieu.

20 January 2018 in Antioxidants & Redox Signaling
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Journal Article
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WLWenyun Lu
Wenyun Lu
LWLin Wang
Lin Wang
LCLi Chen
Li Chen
SHSheng Hui
Sheng Hui
JRJoshua D. Rabinowitz
Joshua D. Rabinowitz
Aims: Accurate analysis of dinucleotide redox cofactors nicotinamide adenine dinucleotide phosphate reduced (NADPH), nicotinamide adenine dinucleotide phosphate (NADP+), nicotinamide adenine dinucleotide reduced (NADH), and nicotinamide adenine dinucleotide (NAD+) from biological samples is important to understanding cellular redox homeostasis. In this study, we aimed to develop a simple protocol for quenching metabolism and extracting NADPH that avoids interconversion among the reduced forms and the oxidized forms. Results: We compared seven different solvents for quenching and extraction of cultured mammalian cells and mouse tissues: a cold aqueous buffer commonly used in enzyme assays with and without detergent, hot aqueous buffer, and cold organic mixtures (80% methanol, buffered 75% acetonitrile, and acidic 40:40:20 acetonitrile:methanol:water with either 0.02 M or 0.1 M formic acid). Extracts were analyzed by liquid chromatography–mass spectrometry (LC-MS). To monitor the metabolite interconversion, cells were grown in 13C6-glucose medium, and unlabeled standards were spiked into the extraction solvents. Interconversion between the oxidized and reduced forms was substantial except for the enzyme assay buffer with detergent, 80% methanol and 40:40:20 acetonitrile:methanol:water, with the 0.1 M formic acid mix giving the least interconversion and best recoveries. Absolute NAD+, NADH, NADP+, and NADPH concentrations in cells and mouse tissues were measured with this approach. Innovation: We found that the interconversion between the reduced and oxidized forms during extraction is a major barrier to accurately measuring NADPH/NADP+ and NADH/NAD+ ratios. Such interconversion can be monitored by isotope labeling cells and spiking NAD(P)(H) standards. Conclusion: Extraction with 40:40:20 acetonitrile:methanol:water with 0.1 M formic acid decreases interconversion and, therefore, is suitable for measurement of redox cofactor ratios using LC-MS. This solvent is also useful for general metabolomics. Samples should be neutralized immediately after extraction to avoid acid-catalyzed degradation. When LC-MS is not available and enzyme assays are accordingly used, inclusion of detergent in the aqueous extraction buffer reduces interconversion. Antioxid. Redox Signal. 28, 167–179.

17 June 2013 in Angewandte Chemie International Edition
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GLGang Li
Gang Li
YLYing Liu
Ying Liu
YLYu Liu
Yu Liu
LCLi Chen
Li Chen
SWSiyu Wu
Siyu Wu
XLXiaoyu Li
Xiaoyu Li

4 October 2017 in Journal of the American Chemical Society
Verified
Journal Article
Closed access
ZZZhaoyue Zhang
Zhaoyue Zhang
LCLi Chen
Li Chen
LLLing Liu
Ling Liu
Xiaoyang SuXiaoyang Su
Xiaoyang Su
JRJoshua D. Rabinowitz
Joshua D. Rabinowitz