Soil bacterial communities play a crucial role in the functioning of estuarine wetlands. Investigating the structure and function of these communities across various wetland types, along with the key factors influencing them, is essential for understanding the relationship between bacteria and wetland ecosystems. The Liaohe Estuary Wetland formed this study’s research area, and soil samples from four distinct wetland types were utilized: suaeda wetlands, reed wetlands, pond returning wetlands, and tidal flat wetlands. The structure and function of the soil bacterial communities were examined using Illumina MiSeq high-throughput sequencing technology in conjunction with the PICRUSt analysis method. The results indicate that different wetland types significantly affect the physical and chemical properties of soil, as well as the structure and function of bacterial communities. The abundance and diversity of soil bacterial communities were highest in the suaeda wetland and lowest in the tidal flat wetland. The dominant bacterial phyla identified were Proteobacteria and Bacteroidota. Furthermore, the dominant bacterial genera identified included RSA9, SZUA_442, and SP4260. The primary functional pathways associated with the bacterial communities involved the biosynthesis of valine, leucine, and isoleucine, as well as lipoic acid metabolism, which are crucial for the carbon and nitrogen cycles. This study enhances our understanding of the mutual feedback between river estuary wetland ecosystems and environmental changes, providing a theoretical foundation for the protection and management of wetlands.

Inundation shifts plant growth, species diversity and ecosystem stability, but it remains unclear how inundation depth shapes the phenotypic variability of clonal plants in an estuary wetland. To reveal the response of clonal plant populations to inundation depth, we calculated the variation of Phragmites australis using shoot height, leaf length, leaf width, leaf biomass and panicle length in the Liaohe estuary wetland. Reproductive allocation was defined by the ratio of panicle length to shoot height. Linear regression showed that shoot height, leaf length, leaf width, leaf biomass and panicle length were negatively correlated with inundation depth, while the ratio of panicle length to shoot height was negatively correlated with inundation depth (p < 0.0001). Based on data regarding the statistical differences of plant phenotypic traits among P. australis, we recognized populations had generated variation differentiation. Compared with other functional traits, the coefficient of variation of leaf-related traits were at a high level. Therefore, leaf parameters would be the most suitable, and they increased the area and weight to support the action of plants during floods. Multivariate statistical analysis suggested that P. australis populations in the Liaohe estuary wetland were divided into two phenotypic clusters, consistent with geographical distance and morphological similarity. Our results provide a novel perspective on the ecological strategy of cloned plants under inundation change and offer theories for the conservation and restoration of estuarine wetland ecosystems.