Shayan Shafiee

Mr. Shayan Shafiee


Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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21 August 2020 in Biomaterials Science
Verified
Journal Article
Closed access
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APAbdul Kareem Parchur
Abdul Kareem Parchur
ZFZhi Fang
Zhi Fang
JJJaidip M Jagtap
Jaidip M Jagtap
GSGayatri Sharma
Gayatri Sharma
CHChristopher Hansen
Christopher Hansen
AJAmit Joshi
Amit Joshi
Left panel: Pseudocolor map of 3 principle components from NIR-II kinetic imaging, Right panel (top to bottom): In vivo Ag 2 S QD NIR-II fluorescence, ex vivo iodine micro-CT, FITC dextran perfusion, and H&E staining in control vs CCM1+/− mice brain.

8 February 2024 in International Journal of Pediatric Otorhinolaryngology
Verified
Journal Article
Closed access
SSShayan Shafiee
Shayan Shafiee
WHWenzhou Hong
Wenzhou Hong
JLJulliette Lucas
Julliette Lucas
PKPawjai Khampang
Pawjai Khampang
CRChristina L. Runge
Christina L. Runge
AJAmit Joshi
Amit Joshi

25 February 2023 in Cancers
Verified
Journal Article
Open access
PDF file
SSShayan Shafiee
Shayan Shafiee
JJJaidip M Jagtap
Jaidip M Jagtap
MZMykhaylo Zayats
Mykhaylo Zayats
JEJonathan Epperlein
Jonathan Epperlein
Anjishnu BanerjeeAnjishnu Banerjee
Anjishnu Banerjee
AJAmit Joshi
Amit Joshi
Delta like canonical notch ligand 4 (Dll4) expression levels in tumors are known to affect the efficacy of cancer therapies. This study aimed to develop a model to predict Dll4 expression levels in tumors using dynamic enhanced near-infrared (NIR) imaging with indocyanine green (ICG). Two rat-based consomic xenograft (CXM) strains of breast cancer with different Dll4 expression levels and eight congenic xenograft strains were studied. Principal component analysis (PCA) was used to visualize and segment tumors, and modified PCA techniques identified and analyzed tumor and normal regions of interest (ROIs). The average NIR intensity for each ROI was calculated from pixel brightness at each time interval, yielding easily interpretable features including the slope of initial ICG uptake, time to peak perfusion, and rate of ICG intensity change after reaching half-maximum intensity. Machine learning algorithms were applied to select discriminative features for classification, and model performance was evaluated with a confusion matrix, receiver operating characteristic curve, and area under the curve. The selected machine learning methods accurately identified host Dll4 expression alterations with sensitivity and specificity above 90%. This may enable stratification of patients for Dll4 targeted therapies. NIR imaging with ICG can noninvasively assess Dll4 expression levels in tumors and aid in effective decision making for cancer therapy.

26 September 2024 in Journal of Biomedical Optics
Verified
Journal Article
Open access
PDF file
CHChristopher Hansen
Christopher Hansen
JJJaidip M Jagtap
Jaidip M Jagtap
APAbdul Kareem Parchur
Abdul Kareem Parchur
GSGayatri Sharma
Gayatri Sharma
SSShayan Shafiee
Shayan Shafiee
AJAmit Joshi
Amit Joshi
SignificanceAlthough the lymphatic system is the second largest circulatory system in the body, there are limited techniques available for characterizing lymphatic vessel function. We report shortwave-infrared (SWIR) imaging for minimally invasive in vivo quantification of lymphatic circulation with superior contrast and resolution compared with near-infrared first window imaging.AimWe aim to study the lymphatic structure and function in vivo via SWIR fluorescence imaging.ApproachWe evaluated subsurface lymphatic circulation in healthy, adult immunocompromised salt-sensitive Sprague–Dawley rats using two fluorescence imaging modalities: near-infrared first window (NIR-I, 700 to 900 nm) and SWIR (900 to 1800 nm) imaging. We also compared two fluorescent imaging probes: indocyanine green (ICG) and silver sulfide quantum dots (QDs) as SWIR lymphatic contrast agents following intradermal footpad delivery in these rats.ResultsSWIR imaging exhibits reduced scattering and autofluorescence background relative to NIR-I imaging. SWIR imaging with ICG provides 1.7 times better resolution and sensitivity than NIR-I, and SWIR imaging with QDs provides nearly two times better resolution and sensitivity with enhanced vessel distinguishability. SWIR images thus provide a more accurate estimation of in vivo vessel size than conventional NIR-I images.ConclusionsSWIR imaging of silver sulfide QDs into the intradermal footpad injection provides superior image resolution compared with conventional imaging techniques using NIR-I imaging with ICG dye.