Tomonari Tanaka

Prof. Dr. Tomonari Tanaka

Department of Biobased Materials Science, Graduate School of Science and Technology, Kyoto Institute of Technology, Matsugasaki, Sakyo-ku, Kyoto 606-8585, Japan
orcid

Research Focus & Metrics

Academic Career Length

26Years (2001-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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13 May 2009 in Chemical Communications
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Journal Article
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TTTomonari Tanaka
Tomonari Tanaka
HNHikaru Nagai
Hikaru Nagai
MNMasato Noguchi
Masato Noguchi
AKAtsushi Kobayashi
Atsushi Kobayashi
SSShin-Ichiro Shoda
Shin-Ichiro Shoda
Various β-glycosyl azides have been synthesized directly in water by the reaction of unprotected sugars and sodium azide mediated by 2-chloro-1,3-dimethylimidazolinium chloride (DMC).

9 February 2009 in The Journal of Organic Chemistry
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Journal Article
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MNMasato Noguchi
Masato Noguchi
TTTomonari Tanaka
Tomonari Tanaka
HGHidetoshi Gyakushi
Hidetoshi Gyakushi
AKAtsushi Kobayashi
Atsushi Kobayashi
SSShin-Ichiro Shoda
Shin-Ichiro Shoda

1 January 2012 in Journal of Biological Chemistry
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Journal Article
Open access
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MKMasashi Kiyohara
Masashi Kiyohara
TNTakashi Nakatomi
Takashi Nakatomi
SKShin Kurihara
Shin Kurihara
SFShinya Fushinobu
Shinya Fushinobu
HSHideyuki Suzuki
Hideyuki Suzuki
HAHisashi Ashida
Hisashi Ashida
Bifidobacteria inhabit the lower intestine of mammals including humans where the mucin gel layer forms a space for commensal bacteria. We previously identified that infant-associated bifidobacteria possess an extracellular membrane-bound endo-α-N-acetylgalactosaminidase (EngBF) that may be involved in degradation and assimilation of mucin-type oligosaccharides. However, EngBF is highly specific for core-1-type O-glycan (Galβ1–3GalNAcα1-Ser/Thr), also called T antigen, which is mainly attached onto gastroduodenal mucins. By contrast, core-3-type O-glycans (GlcNAcβ1–3GalNAcα1-Ser/Thr) are predominantly found on the mucins in the intestines. Here, we identified a novel α-N-acetylgalactosaminidase (NagBb) from Bifidobacterium bifidum JCM 1254 that hydrolyzes the Tn antigen (GalNAcα1-Ser/Thr). Sialyl and galactosyl core-3 (Galβ1–3/4GlcNAcβ1–3(Neu5Acα2–6)GalNAcα1-Ser/Thr), a major tetrasaccharide structure on MUC2 mucin primarily secreted from goblet cells in human sigmoid colon, can be serially hydrolyzed into Tn antigen by previously identified bifidobacterial extracellular glycosidases such as α-sialidase (SiaBb2), lacto-N-biosidase (LnbB), β-galactosidase (BbgIII), and β-N-acetylhexosaminidases (BbhI and BbhII). Because NagBb is an intracellular enzyme without an N-terminal secretion signal sequence, it is likely involved in intracellular degradation and assimilation of Tn antigen-containing polypeptides, which might be incorporated through unknown transporters. Thus, bifidobacteria possess two distinct pathways for assimilation of O-glycans on gastroduodenal and intestinal mucins. NagBb homologs are conserved in infant-associated bifidobacteria, suggesting a significant role for their adaptation within the infant gut, and they were found to form a new glycoside hydrolase family 129.

1 November 2010 in Biochimica et Biophysica Acta (BBA) - General Subjects
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Journal Article
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MUMidori Umekawa
Midori Umekawa
THTakayuki Higashiyama
Takayuki Higashiyama
YKYurie Koga
Yurie Koga
TTTomonari Tanaka
Tomonari Tanaka
MNMasato Noguchi
Masato Noguchi
KYKenji Yamamoto
Kenji Yamamoto

1 May 2009 in Tetrahedron Letters
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Journal Article
Closed access
TTTomonari Tanaka
Tomonari Tanaka
WHWei Chun Huang
Wei Chun Huang
MNMasato Noguchi
Masato Noguchi
AKAtsushi Kobayashi
Atsushi Kobayashi
SSShin-Ichiro Shoda
Shin-Ichiro Shoda

11 April 2009 in Chemistry Letters
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Journal Article
Closed access
TTTomonari Tanaka
Tomonari Tanaka
TMTakeshi Matsumoto
Takeshi Matsumoto
MNMasato Noguchi
Masato Noguchi
AKAtsushi Kobayashi
Atsushi Kobayashi
SSShin-Ichiro Shoda
Shin-Ichiro Shoda
Aryl 1-thioglycosides have directly been synthesized in good yields from the corresponding unprotected sugars and thiols without protection of the hydroxy groups by using 2-chloro-1,3-dimethylimidazolinium chloride (DMC) as dehydrative condensing agent. The reaction proceeded in a mixed solvent of water and acetonitrile under mild reaction conditions, leading to the predominant formation of β-anomers.