Chaobin Qin

Dr. Chaobin Qin


Research Focus & Metrics

Academic Career Length

10Years (2017-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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11 April 2018 in BMC Genomics
Verified
Journal Article
Open access
PDF file
YZYuru Zhang
Yuru Zhang
Chaobin QinChaobin Qin
Chaobin Qin
LYLiping Yang
Liping Yang
RLRonghua Lu
Ronghua Lu
XZXiaoyan Zhao
Xiaoyan Zhao
GNGuo-Xing Nie
Guo-Xing Nie
Glucose plays a key role as an energy source in most mammals, but its importance in fish appears to be limited that so far seemed to belong to diabetic humans only. Several laboratories worldwide have made important efforts in order to better understand this strange phenotype observed in fish. However, the mechanism of carbohydrate/glucose metabolism is astonishingly complex. Why basal glycaemia is different between fish and mammals and how carbohydrate metabolism is different amongst organisms is largely uncharted territory. The utilization of comparative systems biology with model vertebrates to explore fish metabolism has become an essential approach to unravelling hidden in vivo mechanisms. In this study, we first built a database containing 791, 593, 523, 666 and 698 carbohydrate/glucose metabolic genes from the genomes of Danio rerio, Xenopus tropicalis, Gallus gallus, Mus musculus and Homo sapiens, respectively, and most of these genes in our database are predicted to encode specific enzymes that play roles in defined reactions; over 57% of these genes are related to human type 2 diabetes. Then, we systematically compared these genes and found that more than 70% of the carbohydrate/glucose metabolic genes are conserved in the five species. Interestingly, there are 4 zebrafish-specific genes (si:ch211-167b20.8, CABZ01043017.1, socs9 and eif4e1c) and 1 human-specific gene (CALML6) that may alter glucose utilization in their corresponding species. Interestingly, these 5 genes are all carbohydrate regulation factors, but the enzymes themselves are involved in insulin regulation pathways. Lastly, in order to facilitate the use of our data sets, we constructed a glucose metabolism database platform ( http://101.200.43.1:10000/ ). This study provides the first systematic genomic insights into carbohydrate/glucose metabolism. After exhaustive analysis, we found that most metabolic genes are conserved in vertebrates. This work may resolve some of the complexities of carbohydrate/glucose metabolic heterogeneity amongst different vertebrates and may provide a reference for the treatment of diabetes and for applications in the aquaculture industry.

31 March 2023 in Aquaculture Nutrition
Verified
Journal Article
Open access
PDF file
LYLiping Yang
Liping Yang
MZMengjuan Zhao
Mengjuan Zhao
MLMingyu Liu
Mingyu Liu
WZWenlei Zhang
Wenlei Zhang
SZShaoyang Zhi
Shaoyang Zhi
GNGuo-Xing Nie
Guo-Xing Nie
A 56-day feeding trial was conducted to investigate the effects of genistein on growth, lipid metabolism, antioxidant capacity, and immunity of common carp fed with high-carbohydrate or high-fat diets. Five diets were used to feed fish: control diet (5 fat; CO), high-fat diet (11 fat; HF), high-carbohydrate diet (45 carbohydrate; HC), and HF or HC diet with 500mg/kg genistein (FG or CG). Results showed that final body weight (FW) and specific growth rate (SGR) were significantly reduced, but the supplementation with genistein resulted in higher values of FW and SGR than the HF or HC group. Both high carbohydrate and high fat belong to high-energy diets, which may promote lipid deposition. Genistein obviously decreased liver triglyceride (TG) content and alleviated hepatic fat vacuolation in the HF and HC groups. The expression of lipid metabolism genes (cpt-1 and atgl) was markedly higher in the FG group than in the HF group. The lipid synthesis-related genes (fas, acc, and pparγ) were elevated in high-energy diets but recovered to the control level or reduced after genistein treatments. With respect to fatty acid transporter genes, fatp increased in the FG group, and cd36 increased in the CG group. Furthermore, the antioxidant and immune indexes, such as total antioxidant capacity (T-AOC), glutathione peroxidase (GSH-PX), superoxide dismutase (SOD), acid phosphatase (ACP), and lysozyme (LZM) activities, were decreased, while malonate aldehyde (MDA) content, activities of alanine aminotransferase (ALT), and aspartate aminotransferase (AST) were enhanced in the HF and HC groups. The antioxidant and immunity values could be ameliorated by treatment with genistein. Moreover, the transcript levels of antioxidant-related genes (cat, gr, and nrf2) in the liver and anti-inflammatory factors (tgf-β and il-10) and lyz in the head kidney tissue were promoted, although the expression levels of proinflammatory factors (tnf-α and il-6) declined in the genistein supplementation group, which confirmed the antioxidant and immune-enhancing effects of genistein. Therefore, 500mg/kg genistein could ameliorate the negative effects of high-energy diets on immunity.

24 May 2023 in Aquaculture Nutrition
Verified
Journal Article
Open access
PDF file
LYLiping Yang
Liping Yang
MLMingyu Liu
Mingyu Liu
MZMengjuan Zhao
Mengjuan Zhao
SZShaoyang Zhi
Shaoyang Zhi
WZWenlei Zhang
Wenlei Zhang
SWShengpeng Wang
Shengpeng Wang
This study sought to examine the role of bile acids in the regulation of glucose and lipid metabolism, intestinal flora, and growth in high-fat diet-fed common carp (Cyprinus carpio L.). Fish ( ) were fed for 56 days with three different diets, the control diet (CO, 5.4% lipid), high-fat diet (HF, 11% lipid), and high-fat diet with 60 mg/kg bile acids (BAs, 11% lipid). The results showed that high-fat diets resulted in poor growth performance and increased triglyceride (TG) in serum and the liver. The addition of bile acids significantly alleviated the adverse effects of a high-fat diet. The mRNA expression results indicated that bile acids may improve lipid metabolism through the enhancement of the peroxisome proliferator-activated receptor (PPARa). The expression of gluconeogenesis-related phosphoenolpyruvate carboxykinase (PEPCK) mRNA was inhibited, while fibroblast growth factor 19 (FGF19) was significantly higher. Bile acids reshaped the intestinal microflora community, with the level of Bacteroidetes increasing. The correlation analysis indicated that Patescibacteria, Dependentiae, Myxococcota, and Planctomycetota in the gut are associated with genes involved in glucose and lipid metabolism. These results indicated that bile acids could ameliorate the negative effects of high-fat diets on common carp.

1 January 2018 in Biochemical and Biophysical Research Communications
Verified
Journal Article
Closed access
Chaobin QinChaobin Qin
Chaobin Qin
LYLiping Yang
Liping Yang
WZWenjia Zheng
Wenjia Zheng
XYXiao Yan
Xiao Yan
RLRonghua Lu
Ronghua Lu
GNGuo-Xing Nie
Guo-Xing Nie

1 January 2020 in Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology
Verified
Journal Article
Closed access
WZWenli Zhao
Wenli Zhao
Chaobin QinChaobin Qin
Chaobin Qin
GYGuokun Yang
Guokun Yang
XYXiao Yan
Xiao Yan
XMXiaolin Meng
Xiaolin Meng
GNGuo-Xing Nie
Guo-Xing Nie

3 June 2023 in Fish & Shellfish Immunology
Verified
Journal Article
Closed access
SZShaoyang Zhi
Shaoyang Zhi
JWJunli Wang
Junli Wang
YWYiran Wang
Yiran Wang
LYLiping Yang
Liping Yang
Chaobin QinChaobin Qin
Chaobin Qin
GNGuo-Xing Nie
Guo-Xing Nie