Cyanide-resistant non-phosphorylating respiration is known in mitochondria from plants, fungi, and microorganisms but is absent in mammals. It results from the activity of an alternative oxidase (AOX) that conveys electrons directly from the respiratory chain (RC) ubiquinol pool to oxygen. AOX thus provides a bypath that releases constraints on the cytochrome pathway and prevents the over-reduction of the ubiquinone pool, a major source of superoxide. RC dysfunctions and deleterious superoxide overproduction are recurrent themes in human pathologies, ranging from neurodegenerative diseases to cancer, and may be instrumental in ageing. Thus, preventing RC blockade and excess superoxide production by means of AOX should be of considerable interest. However, because of its energy-dissipating properties, AOX might produce deleterious effects of its own in mammals. Here we show that AOX can be safely expressed in the mouse (MitAOX), with major physiological parameters being unaffected. It neither disrupted the activity of other RC components nor decreased oxidative phosphorylation in isolated mitochondria. It conferred cyanide-resistance to mitochondrial substrate oxidation and decreased reactive oxygen species (ROS) production upon RC blockade. Accordingly, AOX expression was able to support cyanide-resistant respiration by intact organs and to afford prolonged protection against a lethal concentration of gaseous cyanide in whole animals. Taken together, these results indicate that AOX expression in the mouse is innocuous and permits to overcome a RC blockade, while reducing associated oxidative insult. Therefore, the MitAOX mice represent a valuable tool in order to investigate the ability of AOX to counteract the panoply of mitochondrial-inherited diseases originating from oxidative phosphorylation defects. In mammalian mitochondria, the energy-producing machinery is powered by the electron transfer to molecular oxygen, a mechanism whose terminal step is mediated by the cyanide-sensitive cytochrome c oxidase (COX). In plants, fungi, microorganisms, and some lower animals (but not in mammals), in addition to the normal pathway, a cyanide-resistant alternative oxidase (AOX) exists. It maintains electron transfer to oxygen even when the normal pathway is blocked. This provides a bypath that releases constraints on the energy producing machinery and prevents the production of deleterious superoxide molecules. Thus, preventing the energy producing machinery blockade and excess superoxide production by means of AOX should be of considerable interest. However, because of its energy-dissipating properties, AOX might produce deleterious effects of its own in mammals. Here we show that the AOX can be safely expressed in a mammal with major physiological and molecular parameters being unaffected. We also show that the AOX is active in vivo where it counteracts the energy producing machinery blockade and reduces in vitro the associated oxidative insult. Up to now, efficient therapies against mitochondrial-associated diseases are lacking dramatically. Therefore, in view of our results, the MitAOX mice represent a precious tool to assess the AOX therapeutic capacity against the panoply of inherited mitochondrial diseases.